Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0932 ATGAAGTATATTCGGAGCAACAGCTTGAAGCGTATCTTCTCCTTCAAGCGACGCAGTTTTGGGGAACCATTTTTTTCCCCTGAAGACACAGAAACTCCTGAAAAAAGACCCACTTGGAAATGCTTCTCTTATCAAGAACTGTTTCATGCCACCAATGGCTTCTGCTCTGATAATGTGGTTGGAAAAGGAGGGTATGCAGAGGTTTATAAGGGAAGATTGGAAGATAAAGAGGAAATTGCAGTGAAGAGACTAACAAAAAGCTGTAATGATGAGAGGAAAGAAAAGGAATTTCTTACAGAGATTGGAACAATTGGTCATGTTTGTCATTCAAATGTTTTACCTCTTCTTGGTTGCTGTATTGAGAATGGGCTTTACCTCGTCTTTGAGTTTTCCACTAGAGGCTCTGTTTCTTCTCTTCTTCATGATGAGAATGAGGCTGTGATGGAATGGAAAACAAGGTATAAGATTGCTGTTGGGACAGCACGTGGCCTTAATTACTTGCACAAAGGTTGTCAGAGAAGGATAATTCACAGAGACATCAAAGCCTCCAACGTTCTTTTGACTTCAGATTTTGAACCACAGATATCTGACTTTGGACTTGCTAAATGGCTTCCTTCTCAGTGGACTCATCATTCCATTGCCCCAATTGAAGGCACATTTGGGCACTTGGCTCCTGAGTACTATCTGCATGGAATTGTGGATGAGAAAACTGATGTATTTGCATTTGGCGTGTTTCTGTTAGAACTCATTTCTGGAAAGAAACCTGTGGATGGATCAAACCAGAGTTTACACAAATGGGCTAGGCCAATATTGAAAAGAGGAGAGATAGAGAAAGTAGTAGATCCAAGGCTTGAAGGAGCTTATGATGTTTCAGAGTTAACAAAGCTTGCTTTTGCAGCCTCTCTCTGTATCCGACCATCTTCCACTTGGAGACCCACCATGACTCAGGTATTAGAGGTAACGGAGGAGAGAGAAATAGATAAAGATAAATGGAAAATACCGGAGGAGGAGGAGGAGGAGGAAGAAGAGGCATGGGGTTTTGAGGATTTGGAATATGAATATGATAGTTTGTCCTCAATGTCTCTCCCTGACTCCATTACGAGTAATTAG 1110 0.4153 MKYIRSNSLKRIFSFKRRSFGEPFFSPEDTETPEKRPTWKCFSYQELFHATNGFCSDNVVGKGGYAEVYKGRLEDKEEIAVKRLTKSCNDERKEKEFLTEIGTIGHVCHSNVLPLLGCCIENGLYLVFEFSTRGSVSSLLHDENEAVMEWKTRYKIAVGTARGLNYLHKGCQRRIIHRDIKASNVLLTSDFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYYLHGIVDEKTDVFAFGVFLLELISGKKPVDGSNQSLHKWARPILKRGEIEKVVDPRLEGAYDVSELTKLAFAASLCIRPSSTWRPTMTQVLEVTEEREIDKDKWKIPEEEEEEEEEAWGFEDLEYEYDSLSSMSLPDSITSN 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0932 369 ProSiteProfiles Protein kinase domain profile. 54 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g0932 369 SUPERFAMILY Protein kinase-like (PK-like) 33 324 IPR011009 -
Lele22g0932 369 ProSitePatterns Serine/Threonine protein kinases active-site signature. 175 187 IPR008271 GO:0004672|GO:0006468
Lele22g0932 369 SMART serkin_6 54 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g0932 369 FunFam Putative receptor-like serine/threonine-protein kinase 132 346 - -
Lele22g0932 369 Pfam Protein kinase domain 57 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g0932 369 FunFam Putative receptor-like serine/threonine-protein kinase 25 130 - -
Lele22g0932 369 ProSitePatterns Protein kinases ATP-binding region signature. 60 82 IPR017441 GO:0005524
Lele22g0932 369 PANTHER OS08G0249100 PROTEIN 28 350 - -
Lele22g0932 369 Gene3D Transferase(Phosphotransferase) domain 1 132 344 - -
Lele22g0932 369 Gene3D Phosphorylase Kinase; domain 1 25 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0932 Lele-ChrLele22 6415221 6420594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0932 24 329 Trihelix Transcription Factor Family AT5G38560 40.506 8.82e-72 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lele22g0932 Pkinase 1.3e-41 CL0016