Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0930 ATGGAGGACTCCCCTCCGTCAGAAGTTGTATTCAGGGTGGGCCAACGAGTACATGCATCTGGTGATTCACGGAGAATTGGTACAGTTAAGTATGTGGGGCCTGTTGAAGGCCATCCTGGCACATGGGTTGGAGTTGATTGGGACAATGGAGATGGAAAACATGATGGATCCAACAAAGGGATCCGATACTTTCATGCAAAGTCTGAAAGATCAGGGTCATTTGTTCGTCCCCAGAATTTGAGCCAAGGCATTTCATTAGTGGAGGCTCTTGAAATCAGATATCGGGGTGACTCCACTAAAGATGAAGAGGATGAAATGTATGTCCTTTCGGCTAGCAACAGGCGAGTCTCTATACAACTTGTAGGAAAAGATAAAGTTAAGGATAAACTAAGTCGATTTGAGGAGTTGACCAGTGCATCACTATCATATATGGGGGTTAGTTCCCCTGGAATTCCATATCATATCAATACTACGATTCCAAATACGAAGGAACTTGATCTGACTGGAAATTTGCTTTCTGAGTGGAAGGATGTTGGTGCAATTTGCGAGCAGTTACCTCTTCTTTGGGCACTCAACTTATCAAACAACTTCATGTCACCATATACATCAGGGCTTCCTTTAGTGAAGAACATCCTTGTTCTGGTTTTAAATAATACTGCTGTAGATTGGGTACAGGTTCAACTGCTTGGACAGTCATTGCCAACTCTTGAAGAGCTACATCTTATGGGAAATAATATAAGCAGAATACTGCCTACGTCTTCCACTGTGGTTGAGGGATTTGATTCTTTGCGGCTGTTGAATCTGGATAATAATTGTATAGCTGAATGGGAAGAAATCATGAAGCTATCTCAGCTAAGAAGTTTGGAGCAGCTTTATTTGAACAAAAATTGTTTGAACTGCATCCATTATCCTGATCATGCTGGGAAGTATGAATCGGAAGTTATTTGCCATAAGCCTTTTCAGAATTTGCGCTGTCTTCTATTAGGTGGCAACAACATCGGGGATCTGGCTTCTATTGATTCATTGAATTTGTTCCCTAAATTGGTGGAAGTCAGGCTTTCTGAAAACTTAATTACTGATCCTGCAAGAGGTGGAGTTCCCCGATTTGTTTTGATTGCAAGATTAGCAAAAATTCAGATTCTGAACGGGAGTGAGATTAGCCCTCGAGAGAGGAAGGACTCAGAGATTAGGTATGTACGGTTGGTGATGTCAAGGTCGCTTGCTAATCCTGAAGAAATCAAACAGCATCCCAGGTTTTCTGAACTCAAGAAATTTTACGGAATTGAAGAGGAAATGCCCTCAACTGGAACTTCAGGCCCACGAACAATGGCTTCAGGACTCCTGTCTATCACTCTGAAGTGTGTGGGACCATCCATGGGTGAGAAGCCACCATTGACGAAGAAACTGCCAGCAACAACAACAGTTGGGAAGCTAAAATTGCTGTGTGAAAGCTTCTTTAAGCTGCAGTCCGTGAACCTAAAATTATATCTTCAAGAAGAGGGCTCTCCCATGCCTCTTTTGCTTGACAATGACATGGAATCTTTCTTTGACCTTGGAATTGGCAATGAATCAATTATCCTTAATAGTTTGTCGCGAGTTACTCGGAATCTCTCTTGGTGTTATTTGCTGTTATTGTTCTGCCTTCAGGGAATAATACAGAGAGCAAAGATGGCTAAAGGTTTGAAGAAAAGCAACTTTGAAGTTCTGGGAATGTGTTGTAATTCAGAGGTGGCTTTGATTGAAAGGATTCTGAAGGGTCTCCATGGAGTCAAGGAGATTTCAGTCATGTTCCCGACCAGAACAGTCACTCTAGTCCATGATCTTGATCTAATCTCTGAGTCACAAATCACTGATGCACTGAACATGGCAAGGCTTGAAGCTAGTTTGAAACCAGAAGGAGAGACTAAGCATGAAAAGAAATGGCCAGCAACAAGTACTTTGGCTTGTGGCTTGTTACTTGCACTTTCTTTTTTGAAGTATGTTTATCAACCTTTGGAATTCTTTGCTATTGGTGCTTTTGTTGTGGGTTCCCCTAGAATTCTATTAAGAGGCATAGCTTCCATCAGGAATCTCTCCCTTGATATCAACATTCTGGTTCTATTGGCAGTGTTTGGTACTCTTGCTCTGGGAGATTTCTTGGAAGCTGGAATCATCACCTTCCTATTCTCCATTGCTCAATGGCTAGAGACTGTAGCAAGTTACAAGGCTATGGCCACTATGTCCTCTTTAACAAACATGACTCCTCAAAGGGCAATTATTGCTGAGACTGGTGAACAAGTTGATGTCAATGAAGTTAAAATCAACACTGTTCTTGCAGTCAAGGCTGGTGATGCTATTCCTCTTGATGGTATTGTTGTCGAAGGGAAATGTGAAGTCGACGAAAAAATGTTGACCGGAGAGTCATTCCCTGTCACCAAAGAGTTAGATTCAAGTGTTTGGGCAGGCACTATTAATCTAAATGGTTATATCAGTGTGAAAACAACTGCATTGGCAAAAGACACAGCAGTGGCAAGAATGACAAAGCTTGTTGAAGAGGCTCATGGCAGAAAATCCAGAACTCAAAGATTCATAGATACCTGTGCAAAGTACTATGTACCTGGGGTTTTCTTGATATCAGTTGGTGTTGCTGTGATTCCCATGGCATTAAGGGTTCCCAACATTAAGTATTGGGGTCACATGGCTATTGTGGTTTTAGTAAGTGCATGCCCTTGTGCTCTTATTCTCTCCACACCTGTTACAATCTTCTGTGCCCTCACAAAAGCTGCCACAAGTGGGTTGCTTCTTAAAGGTGGAGATTATGTAGAAGCACTTGCTGGGATTAAGATCCTGGCTTTTGATAAGACTGGCACATTGACAAAAGGGGAGTTCACTGTCACAGAATTTTCTGCTGTTGGAGATGATGATATTAACATTCAACTGTTACTTTACTGGGTTACTAGTATTGAGAGTAAATCAAGTCACCCTATGGCAGCTGCGCTTTTGGAATATGGAAGGCTACATGGTATCAAACCAATCCCTGAAAATGTGGAGGATTTTCAGAATTTTCCAGGAGAAGGAGTTTACGGTAAAATCGATGGCAAAGATGTTTATATTGGCAACAGGAAAATATGTGTGAGAGCTGGTTGTGAAAGTGAGTTTCTAAGCAAAGAAGAAAGAAATGGTTATATATGCTATGGACCAACTCTAGTTGGAGGGTTCAGCTTATCAGATACATGTAGATATGGAGCTTTAGAGGCAATAGAGGAGCTTAAGTCATTAGGAGTGAAATCAGCAATGCTGACAGGAGACAGCACTCGTGCTGCTACACTTGTTCTAACTCAGTTGAATCATGCTCTAGACATAGTTCATGCAGAGCTTCTACCACATGAAAAAGCAGTGATCATTGAGAATTTCAAGAACGATGGGCTGATGACAGCGATGATTGGAGACGGTATAAACGATGCTCCAGCATTAGCCACAGCTGATGTGGGCATCTCAATGGGGATCTCAGGTTCAGCTCTTGCAGTAGAGACAGGGCACGCAATTCTCATGTCAAACGACATCAGGAAGATACCTGAAGCAATTCATCTTGCAAGAAGAACTTTCAGAAAGCTCGTTCAGAATGTCGTTTTCTCTGTTGTTACAAAGGGTTTGATCCTAGCTCTGGCACTAGCAGGTTACCCACTGGTTTGGCTCGCCGTTTTGACTGATGTTGGAACCTGCTTGCTTGTGATTCTCAACAGCATGTTACTTCTGAACGAGAAAAAACACAAGAACAAAAGAGTACCCAGTAAATCCAAATATGGGTTGTTCAATAAGGATAAGAAGGAGCCATTACTTGAAAAGAAAATGGATTGTGGTGAAGGATGCTGCAGTAATGTGTCTTGTGAAGTGACCATTGCTAGTACCGCAACTGAATGCGAAAAAGCTTGTTGTTCAGATTCTGGGGCTTGTGGGAAAGGGGTCTCAGACGATGTTGGAAGATCAGAGAGTTGCAACGATGGGTGTTGTGGAAAAGTAAGGCGTGAGGAGGAGGAGTCTTCATGCAGAAAGAAGGGTAGATGTAGCTCTTATTGTTGCCAGCCGAAGAACACAGAAGTGAAGGTTGATACAGAGAAGTGTGGAAGCCAACAATGCTGCAAAGAATCAAGGAACATATGCTGTGTCGATGGTTATAACATGCCAGAAATTGTGATTGAGTGA 4182 0.4223 MEDSPPSEVVFRVGQRVHASGDSRRIGTVKYVGPVEGHPGTWVGVDWDNGDGKHDGSNKGIRYFHAKSERSGSFVRPQNLSQGISLVEALEIRYRGDSTKDEEDEMYVLSASNRRVSIQLVGKDKVKDKLSRFEELTSASLSYMGVSSPGIPYHINTTIPNTKELDLTGNLLSEWKDVGAICEQLPLLWALNLSNNFMSPYTSGLPLVKNILVLVLNNTAVDWVQVQLLGQSLPTLEELHLMGNNISRILPTSSTVVEGFDSLRLLNLDNNCIAEWEEIMKLSQLRSLEQLYLNKNCLNCIHYPDHAGKYESEVICHKPFQNLRCLLLGGNNIGDLASIDSLNLFPKLVEVRLSENLITDPARGGVPRFVLIARLAKIQILNGSEISPRERKDSEIRYVRLVMSRSLANPEEIKQHPRFSELKKFYGIEEEMPSTGTSGPRTMASGLLSITLKCVGPSMGEKPPLTKKLPATTTVGKLKLLCESFFKLQSVNLKLYLQEEGSPMPLLLDNDMESFFDLGIGNESIILNSLSRVTRNLSWCYLLLLFCLQGIIQRAKMAKGLKKSNFEVLGMCCNSEVALIERILKGLHGVKEISVMFPTRTVTLVHDLDLISESQITDALNMARLEASLKPEGETKHEKKWPATSTLACGLLLALSFLKYVYQPLEFFAIGAFVVGSPRILLRGIASIRNLSLDINILVLLAVFGTLALGDFLEAGIITFLFSIAQWLETVASYKAMATMSSLTNMTPQRAIIAETGEQVDVNEVKINTVLAVKAGDAIPLDGIVVEGKCEVDEKMLTGESFPVTKELDSSVWAGTINLNGYISVKTTALAKDTAVARMTKLVEEAHGRKSRTQRFIDTCAKYYVPGVFLISVGVAVIPMALRVPNIKYWGHMAIVVLVSACPCALILSTPVTIFCALTKAATSGLLLKGGDYVEALAGIKILAFDKTGTLTKGEFTVTEFSAVGDDDINIQLLLYWVTSIESKSSHPMAAALLEYGRLHGIKPIPENVEDFQNFPGEGVYGKIDGKDVYIGNRKICVRAGCESEFLSKEERNGYICYGPTLVGGFSLSDTCRYGALEAIEELKSLGVKSAMLTGDSTRAATLVLTQLNHALDIVHAELLPHEKAVIIENFKNDGLMTAMIGDGINDAPALATADVGISMGISGSALAVETGHAILMSNDIRKIPEAIHLARRTFRKLVQNVVFSVVTKGLILALALAGYPLVWLAVLTDVGTCLLVILNSMLLLNEKKHKNKRVPSKSKYGLFNKDKKEPLLEKKMDCGEGCCSNVSCEVTIASTATECEKACCSDSGACGKGVSDDVGRSESCNDGCCGKVRREEEESSCRKKGRCSSYCCQPKNTEVKVDTEKCGSQQCCKESRNICCVDGYNMPEIVIE 1393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0930 1393 ProSitePatterns Hypothetical cof family signature 2. 1141 1163 - -
Lele22g0930 1393 Pfam CAP-Gly domain 13 79 IPR000938 -
Lele22g0930 1393 PRINTS H+-transporting ATPase (proton pump) signature 1141 1157 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele22g0930 1393 PRINTS H+-transporting ATPase (proton pump) signature 1173 1198 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele22g0930 1393 SUPERFAMILY Calcium ATPase, transduction domain A 757 843 IPR008250 -
Lele22g0930 1393 SUPERFAMILY Cap-Gly domain 11 147 IPR036859 -
Lele22g0930 1393 SFLD C1.7: P-type atpase like 927 1194 - -
Lele22g0930 1393 FunFam Tubulin-folding cofactor E 236 403 - -
Lele22g0930 1393 FunFam Tubulin-folding cofactor E 7 85 - -
Lele22g0930 1393 SUPERFAMILY HAD-like 943 1242 IPR036412 -
Lele22g0930 1393 Pfam E1-E2 ATPase 754 922 - -
Lele22g0930 1393 CDD Ubl_TBCE 447 527 IPR044079 -
Lele22g0930 1393 FunFam Copper-transporting ATPase 1, putative 733 847 - -
Lele22g0930 1393 TIGRFAM ATPase-IB2_Cd: cadmium-translocating P-type ATPase 695 1245 - -
Lele22g0930 1393 SUPERFAMILY HMA, heavy metal-associated domain 559 631 IPR036163 GO:0046872
Lele22g0930 1393 FunFam Putative cadmium/zinc-transporting ATPase 3 558 630 - -
Lele22g0930 1393 Gene3D - 732 847 - -
Lele22g0930 1393 SFLD p-type atpase 927 1194 IPR044492 -
Lele22g0930 1393 SUPERFAMILY Ubiquitin-like 442 526 IPR029071 -
Lele22g0930 1393 Gene3D - 3 86 IPR036859 -
Lele22g0930 1393 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 718 1221 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele22g0930 1393 SUPERFAMILY L domain-like 128 384 - -
Lele22g0930 1393 Gene3D Ribonuclease Inhibitor 105 207 IPR032675 -
Lele22g0930 1393 ProSiteProfiles Leucine-rich repeat profile. 322 343 IPR001611 GO:0005515
Lele22g0930 1393 Gene3D Ribonuclease Inhibitor 208 316 IPR032675 -
Lele22g0930 1393 PRINTS P-type cation-transporting ATPase superfamily signature 1141 1160 - -
Lele22g0930 1393 PRINTS P-type cation-transporting ATPase superfamily signature 793 807 - -
Lele22g0930 1393 PRINTS P-type cation-transporting ATPase superfamily signature 944 958 - -
Lele22g0930 1393 PRINTS P-type cation-transporting ATPase superfamily signature 1086 1096 - -
Lele22g0930 1393 ProSiteProfiles Leucine-rich repeat profile. 262 283 IPR001611 GO:0005515
Lele22g0930 1393 Gene3D - 440 531 - -
Lele22g0930 1393 SUPERFAMILY Calcium ATPase, transmembrane domain M 695 1265 IPR023298 -
Lele22g0930 1393 Gene3D - 955 1072 IPR023299 GO:0000166
Lele22g0930 1393 ProSiteProfiles CAP-Gly domain profile. 33 76 IPR000938 -
Lele22g0930 1393 Pfam haloacid dehalogenase-like hydrolase 940 1155 - -
Lele22g0930 1393 ProSiteProfiles Heavy-metal-associated domain profile. 563 629 IPR006121 GO:0046872
Lele22g0930 1393 SMART CAP_GLY_2 13 81 IPR000938 -
Lele22g0930 1393 FunFam Tubulin-folding cofactor E 439 530 - -
Lele22g0930 1393 ProSitePatterns CAP-Gly domain signature. 33 64 IPR000938 -
Lele22g0930 1393 FunFam Putative cadmium/zinc-transporting ATPase 3 955 1072 - -
Lele22g0930 1393 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 695 1244 IPR027256 GO:0006812|GO:0016020|GO:0019829
Lele22g0930 1393 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 558 1248 - -
Lele22g0930 1393 ProSitePatterns E1-E2 ATPases phosphorylation site. 946 952 IPR018303 -
Lele22g0930 1393 Gene3D - 558 630 - -
Lele22g0930 1393 CDD HMA 566 628 IPR006121 GO:0046872
Lele22g0930 1393 FunFam Tubulin-folding cofactor E 88 222 - -
Lele22g0930 1393 Gene3D - 935 1192 IPR023214 -
Lele22g0930 1393 Gene3D Ribonuclease Inhibitor 317 402 IPR032675 -
Lele22g0930 1393 CDD P-type_ATPase_HM 645 1243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0930 Lele-ChrLele22 6383181 6402295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0930 558 1345 Primary Pumps ATPases AT4G30110 54.245 0.0 877