Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0927 ATGGAGTGGGACAGCGATTCGGATCTAAGCGGCGACGAGGAGGAGACCTTCGCGCTCAACGATGGAGGCCCCCTTCCCTTCCCGGTCGAAAACTTGCTCCAAACGACTCCCTGTGGGTTCGTCGTCACCGATTCGCTCGAGCCTGACCACCCTATTATTTATGTCAATACTGTGTTCGAGATGGTCACTGGGTATCGGGCAGAGGAAGTGCTTGGTCGCAACTGGTGCCTTTGGGTAGTGTTCCTTGAACCACTGCTTTCCTGGGAACATGTTGAGACAAACATTTTAACGAGTCGTAATAACAGGAAGGACGTTTATTTTCCTTTCAGGGGTGGAGCATGCTGCCCTTGTTAG 354 0.5226 MEWDSDSDLSGDEEETFALNDGGPLPFPVENLLQTTPCGFVVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLGRNWCLWVVFLEPLLSWEHVETNILTSRNNRKDVYFPFRGGACCPC 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0927 117 CDD PAS 36 75 IPR000014 -
Lele22g0927 117 Pfam PAS fold 30 74 IPR013767 GO:0006355
Lele22g0927 117 SUPERFAMILY PYP-like sensor domain (PAS domain) 31 97 IPR035965 -
Lele22g0927 117 MobiDBLite consensus disorder prediction 1 23 - -
Lele22g0927 117 ProSiteProfiles PAS repeat profile. 29 74 IPR000014 -
Lele22g0927 117 Gene3D PAS domain 22 105 - -
Lele22g0927 117 MobiDBLite consensus disorder prediction 1 15 - -
Lele22g0927 117 PANTHER PROTEIN TWIN LOV 1 40 74 - -
Lele22g0927 117 TIGRFAM sensory_box: PAS domain S-box protein 32 88 IPR000014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0927 Lele-ChrLele22 6369425 6370677 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0927 29 74 AGC Kinase Gene Family AT3G45780 43.478 4.71e-07 45.1