Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0922 ATGGGGGGAGACAAGGCAATCAGCCTTGAAGGGATCAAGAACGAGGCCGTTGATCTGGTTTCATTTCTGTTTCCTCAAGATGTTGATGATGTGATTTTAACTTTGGATTCTTGAGAGTCTCTTCCTGTGACCAAAAACCCTGGAGACGAAGTCTTCTCTGGCTCAACTTGCAAACAAGGTGAAATTGAAGCTGTTGTTATTGCCACCGGTGTCCACACGTTCTTCGGGAAGGCGGCTCACCTTGTGGACAGCACTAACCAAGTTGGTCATTTCCAGAAGGCAAGGACTGGGATTAGAGAGGTGCATTTCTTCCCATTCAATCCTGTTGACAAGAGAACTGCTTTGACTTACATTGAAGCTGATGGAAGTTGGCACCGGTCAAGCAAAGGTGCTCCCGAGCAGATCATGACCCTGTGCAACCTAAGGGAAGATGTTAAGAAGAAGGTCCATGCCATTATTGACAAGTTTGCAGAGAGAGGCCTTCGTTCACTTGCTGTTGCAAGACAGGAAGTTCCTGAGAGAACCAAAGAAAGCGCCGGTGCTCCATGGCAGTTTGCCGGGTTGTTGTCACTGTTTGACCCCCCTAGGCATGACAGTGCTGAAACCATCCGACGAGCTCTTAATCTTGGAGTAAATGTCAAGATGATTACTGGTGATCAACTAGCCATAGCAAAGGAGACAGGAAGGAGACTTGGCATGGGAACAAATATGTACCCATCTGCTTCCTTGCTTGGTCAAGATAAAGATGCAAATATTGCATCACTTCCTGTGGAAGAGTTGATTGAGAAGGCGGATGGATTTGCTGGTGTATTTCCAGGTTCAATATTCTCTTTCTGCTACTTTCTCTCAACAATTTTGCTAGTCCTGAGTCCTGAACTTTTATATTATCTATTGCTACGGTTGTTTCCAGAGCACAAATATGAAATTGTGAGGAAATTGCAAGAGAGGAAACACATTTGTGGAATGACTGGGGATGGTGTCAATGATGCTCCTGCTCTGAAGAAGGCCGATATCGGTATCGCAGTCGCCGATGCAACCGATGCCGCAAGAAGTGCTTCTGATATTGTCTTGACTGAACCTGGATTGAGTGTCATTATTAGTGCAGTCTTGACTAGCAGAGCTATTTTCCAAAGAATGAAAAACTACACTATCTATGCGGTCTCCATCACTATACGTATAGTGTTTGGATTCATGTTCATTGCACTGATATGGAAATTTGACTTCTCTCCTTTCATGGTTTTGATTATTGCCATCCTAAATGACGGAACAATCATGACAATTTCAAAAGACAGAGTGAAGCCATCTCCCTTGCCTGATAGTTGGAAGCTGAAAGAAATTTTTGCCACTGGGGTTGTGCTTGGAGGTTACTTGGCTCTGATGACTGTCATATTTTTCTGGGCAATGAAAGAAACTGACTTCTTCCACGACAAATTCAACGTTAGACCTCTGAATGACAGCCCACATGAAATGATGTCTGCATTGTACCTTCAAGTCAGTATAGTGAGCCAGGCTCTTATATTCGTGACCCGTTCTCGTAGTTGGTCCTACGTTGAACGCCCCGGATTGCTTTTAGTCAGTGCCTTCATTATTGCTCAGCTGATTGCTACCTTCATAGCAGTATATGCTGACTGGGGATTTGCAAAGATCAAAGGAATTGGATGGGGTTGGGCTGGAGTTGTCTGGCTCTACAGTGTTGTCTTCTATGTTCCACTCGACTTTCTAAAATTCGCTATCCGTTACATCCTAAGTGGCAAAGCTTGGAACAATCTACTAGAAAACAAGATTGCCTTCACCACCAAGAAAGACTATGGAAAGGAGGAGAGGGAGGCTCAATGGGCACTTGCTCAGAGGACACTCCATGGACTTCAACCTCCAGAAACTTCTAGCATTTTCAACGATAAACACAGCTACAGAGAGCTCTCTGAGATTGCTGAGCAGGCCAAGAGACGAGCTGAAGTTGCAAAGCTTCGCGAGCTTCACACGCTTAAGGGACATGTTGAGTCAGTGGTGAAGCTGAAAGGTCTGGACATTGACACAATTCAGCAGCACTACACTGTTTACAAACTGAAGTATGGAACTGAGACAGAATCTTCTTTGAAGCCTTGCAAGGACTAA 2115 0.4473 MGGDKAISLEGIKNEAVDLVSFLFPQDVDDVILTLDSXESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKARTGIREVHFFPFNPVDKRTALTYIEADGSWHRSSKGAPEQIMTLCNLREDVKKKVHAIIDKFAERGLRSLAVARQEVPERTKESAGAPWQFAGLLSLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDANIASLPVEELIEKADGFAGVFPGSIFSFCYFLSTILLVLSPELLYYLLLRLFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGGYLALMTVIFFWAMKETDFFHDKFNVRPLNDSPHEMMSALYLQVSIVSQALIFVTRSRSWSYVERPGLLLVSAFIIAQLIATFIAVYADWGFAKIKGIGWGWAGVVWLYSVVFYVPLDFLKFAIRYILSGKAWNNLLENKIAFTTKKDYGKEEREAQWALAQRTLHGLQPPETSSIFNDKHSYRELSEIAEQAKRRAEVAKLRELHTLKGHVESVVKLKGLDIDTIQQHYTVYKLKYGTETESSLKPCKD 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0922 704 Pfam haloacid dehalogenase-like hydrolase 303 337 - -
Lele22g0922 704 Gene3D - 635 686 - -
Lele22g0922 704 PRINTS H+-transporting ATPase (proton pump) signature 149 167 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele22g0922 704 PRINTS H+-transporting ATPase (proton pump) signature 264 280 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele22g0922 704 PRINTS H+-transporting ATPase (proton pump) signature 495 516 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele22g0922 704 PRINTS P-type cation-transporting ATPase superfamily signature 187 198 - -
Lele22g0922 704 PRINTS P-type cation-transporting ATPase superfamily signature 209 219 - -
Lele22g0922 704 PRINTS P-type cation-transporting ATPase superfamily signature 323 342 - -
Lele22g0922 704 PRINTS P-type cation-transporting ATPase superfamily signature 346 358 - -
Lele22g0922 704 FunFam Membrane H(+)-ATPase1 132 192 - -
Lele22g0922 704 SUPERFAMILY HAD-like 184 369 IPR036412 -
Lele22g0922 704 Coils Coil 637 657 - -
Lele22g0922 704 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 298 412 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele22g0922 704 Gene3D - 39 69 - -
Lele22g0922 704 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 88 198 IPR023299 GO:0000166
Lele22g0922 704 Gene3D - 70 84 - -
Lele22g0922 704 Gene3D - 361 550 - -
Lele22g0922 704 Pfam E1-E2 ATPase 39 93 - -
Lele22g0922 704 PANTHER CALCIUM-TRANSPORTING ATPASE 27 96 - -
Lele22g0922 704 FunFam Plasma membrane ATPase 297 371 - -
Lele22g0922 704 FunFam ATPase 4 plasma membrane-type 308 550 - -
Lele22g0922 704 FunFam ATPase 2, plasma membrane-type 184 284 - -
Lele22g0922 704 Gene3D - 90 192 IPR023299 GO:0000166
Lele22g0922 704 SUPERFAMILY Calcium ATPase, transduction domain A 39 82 IPR008250 -
Lele22g0922 704 SUPERFAMILY Calcium ATPase, transmembrane domain M 372 582 IPR023298 -
Lele22g0922 704 Gene3D - 193 272 IPR023214 -
Lele22g0922 704 Gene3D - 300 360 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0922 Lele-ChrLele22 6327188 6334540 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0922 92 686 Primary Pumps ATPases AT2G24520 78.151 0.0 981