Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0907 ATGACGACGGAGAAGGAAGGAGGGAGGAAGATGAAGAAGAGTTACTTCGATGTGGTCGGATTATGCTGTTCGTCGGAGGTTCCGCTGATAGAGAGCATCCTAAAACCTCTCGAAGGAATTAAAGAGGTTTCCGTCATCGTCCCTTCACGAACCGTCATTGTCGTTCACGACACTCTGCTCATTTCTCAGTTCCAAATTGCTAAGGCGCTAAGCCAAGCAAGATTGGAGGCGAGTGTGAGGGTGCATGGCGATGAAAAGGAGAAGGAGAAGAAGAAGAAATGGCCGAGCCCTTACGCAATGGCGTCAGGAATATTGGTGGTGGTGTCACTGTTCAAATACGTGTATAGCCCACTCGAGTACGTGGCCTTAGGAGCTGTAGCTGCTGGTGCTCTCCCCATTCTGCTCAAAGCTCTCTCCTCCCTTCGCTACTTACGACTTGACATTAACATCCTCCTCGTCATGGCAGTTGCTGGAACGATAGCTATGCATGATTACGTGGAAGCTGCCACCATCGTTTTCCTCTTCTCCATTGCCGAATGGCTGGAGTCAAGAGCTAGTCACAAGGCAAGTGCAGCAATGTCATCGTTGATGAACATAGCTCCCCAGAAAGCAACCGTAGCCGAAACAGGAGAGATTGTGGAGGCCGACGAGGTCAAATTGAACACAGTACTAGCCGTGAAAGCAGGGGAAGTGATACCAATGGATGGAATTGTTGTAGATGGAACCTGTGAAGTCGATGAGAAAACTTTGACCGGCGAGTCATTCCCTGTACCCAAACAAAAAGACTCTACTGTGTGGGCTGGCACTATCAATCTAAATGGTTATATTTGTGTTAAAACTAATGCGCTAGCTGAGGATTGCGTGGTAGCGAAAATGGCAAAGCTAGTGGAAGAAGCACAAAACAGTAAAACCAGGAGCCAGAGATTGATAGACAAGTTTGCCAAGTTTTATACCCCAGCTGTTGTAATCATATCAACACTTGTAGCGGTGATTCCAGTTTTGTTGAGAGTACACAATGTGAAACATTGGTTTCACTTTGCACTTGTCGTTCTAGTAAGCGCATGTCCCTGTGCCCTTGTTCTTTCTACACCAGTTGTGACTTTCTGTGCGTACACAAAAGCGGCCACATCAGGTCTTCTCATCAAAGGGGGTGATTACCTGGAAACCCTTGCAAAAGTTAAGGTCATGGCCTTTGACAAAACTGGAACTATTACAAAGGGTGAATTTGTGGTGACAAATTTCCAATCTCTTTGCGATGATGTAGATTTGAAAACGTTAATTTACTGGGTCTCAAGCATCCAAAGTAAGTCAAGTCATCCATTGGCAGCAGCAATTATTGATTATGGGAAGTCATTTTGTATTGATCCTAAGCCAGAAGAGGTGACAGACTATGAAAACTTTCCTGGAGAAGGTATTTGTGGAAAAATTGATGACAGATATGTTTACCTTGGAAATAGAAATATTGTCTCAAGAGCTGGGTCTAAGACAGTTCCTACCTTAGAAGGTGGCTCTCAGGGAGGAAAGACTATTGGCTATATATACTCAGGAGCAACTCCAATTGGAGTTTTCTCTCTTTCAGATGCTTGCCGCTCTGGGGTAGTGGAGGCTATAGGGCAGCTAAAGTTATTGGGTATCAAAACTTGTATGCTTACTGGAGATAGCCATGCAGCTGCCATGCAGGCCCAAGAGCAGCTAGGGCATGCTTTGGAGCAAGTCCACGCAGAACTTTTACCAGAAGGAAAAGCAAAAATCATCACAGAATTCAAAAAGGAAGGACCAACAGCCATGGTAGGAGATGGTGTGAATGATGCCCCAGCATTAGCTGCTGCTGATATTGGCATCTCGATGGGCATTTCAGGTTCTGCACTAGCAAGTGAAACAGGAAATATAATTCTCATGTCCAATGACATGAGGAAGATACCACAAGCGATTAAGCTTGCAAGAAAATCTCGTAGGAAAGTAATAGAAAATATTATATTGTCAGTCGTGACTAAGGCTGCAATTATTGGCTTGGCCTTTGCTGGTCATCCGCTTGTTTGGGCAGCAGTTCTTGCCGATGTTGGGACATGCTTGTTGGTAATCTTAAACAGCATGCTCCTTCTGCGCAGTGGAGAGAAGCATGGAGGAAAATGTTGTAGATCTTCCACTCAGCTACACCTCCATAAAAGTGGATGTCATGCCCATGATGGCAAATCTTCTCATCACCATCACCACCACCATCACCATCATCAACACAAGTATGATAATCATCAGCATTCTAAATTTATAGAAAGCCATGACCAATGTAATTCCAGTGTTGAAATCCATGAACCAAATCTCTGTCATCATGGAAGATGTGAGAAAGGTGATGTCCAGTCACATGATGCAGAAATACATAGTTGTTTAGGCTCTCAGGATAGGATAATGATCGGAGCAGATAAGTGTACAACTTCAACAGACAGTCACGGTAGTTGTTTGGAACATGGTAACTCCCACAGCATATCACATTGCCTCAAAAGAAATTTTGATCCAATCTCTCATGATGGAGCGTCAATGGGTTCTACCTGCCATTTCATGCACTCATATGATATAGAAAGCCAGGCTTTTTCAGGGTCTCCTCACATGATTCTGACAGGAGCAGATAAATGTTCGAGTTCAATAGATAATCATGACTATTTGGAACATAAGTCCCACAAGACATTACATTGCCACAACAGACATTGTGGCCCAGTCAATCATCATGAAGCATCACTTGTTTCTCCCTGCCACTTGATCAATGATTTTGAAATTACTGAAGATCAAAATCTCAGAAAGACAATAAGATGCAATCATGAAATTGAGCATCAAAGTCCAGGGCCTCTATCTGACTTTAAGGTCTGTGGGGACGATCATATTGCATGTAATCATGAAATTAAGCACGCGGAATCAGCCTCAATGCATGCTTTTGGGAGTTGTGAAGAGCAAGAAAAATATTCTTGTTGCAAAGGTTGTCCAGACGAATGTAACGAATGTCCTGTTGTGCGCGCGCATCCGTGTTCAAATGAGATAGAAGCTGGTGCATCTGTTGAGGGCTCTTCAAAGAAATCCATTCCAGTGGCGCATGCTTGTATTAGTTTGCACAAGAGAGATATTGGTGGGTGTTGCAAGAGCTACATAAAGGAATGCTGTAGCAAGCATGGACATTTCGGGGTGGGTTCTGGAGGTTTATCCAAAATTATTACAGAACAGGTAGAACTCAAAACTCCTCACCAGAAGTGCATATCTGCTGTAACATCTTGGTTGTTAGGAACTTTGCTCATCAACGCATTTGGGGGGAAAAGTGAAGGAAAATCACCCCTATAG 3321 0.4387 MTTEKEGGRKMKKSYFDVVGLCCSSEVPLIESILKPLEGIKEVSVIVPSRTVIVVHDTLLISQFQIAKALSQARLEASVRVHGDEKEKEKKKKWPSPYAMASGILVVVSLFKYVYSPLEYVALGAVAAGALPILLKALSSLRYLRLDINILLVMAVAGTIAMHDYVEAATIVFLFSIAEWLESRASHKASAAMSSLMNIAPQKATVAETGEIVEADEVKLNTVLAVKAGEVIPMDGIVVDGTCEVDEKTLTGESFPVPKQKDSTVWAGTINLNGYICVKTNALAEDCVVAKMAKLVEEAQNSKTRSQRLIDKFAKFYTPAVVIISTLVAVIPVLLRVHNVKHWFHFALVVLVSACPCALVLSTPVVTFCAYTKAATSGLLIKGGDYLETLAKVKVMAFDKTGTITKGEFVVTNFQSLCDDVDLKTLIYWVSSIQSKSSHPLAAAIIDYGKSFCIDPKPEEVTDYENFPGEGICGKIDDRYVYLGNRNIVSRAGSKTVPTLEGGSQGGKTIGYIYSGATPIGVFSLSDACRSGVVEAIGQLKLLGIKTCMLTGDSHAAAMQAQEQLGHALEQVHAELLPEGKAKIITEFKKEGPTAMVGDGVNDAPALAAADIGISMGISGSALASETGNIILMSNDMRKIPQAIKLARKSRRKVIENIILSVVTKAAIIGLAFAGHPLVWAAVLADVGTCLLVILNSMLLLRSGEKHGGKCCRSSTQLHLHKSGCHAHDGKSSHHHHHHHHHHQHKYDNHQHSKFIESHDQCNSSVEIHEPNLCHHGRCEKGDVQSHDAEIHSCLGSQDRIMIGADKCTTSTDSHGSCLEHGNSHSISHCLKRNFDPISHDGASMGSTCHFMHSYDIESQAFSGSPHMILTGADKCSSSIDNHDYLEHKSHKTLHCHNRHCGPVNHHEASLVSPCHLINDFEITEDQNLRKTIRCNHEIEHQSPGPLSDFKVCGDDHIACNHEIKHAESASMHAFGSCEEQEKYSCCKGCPDECNECPVVRAHPCSNEIEAGASVEGSSKKSIPVAHACISLHKRDIGGCCKSYIKECCSKHGHFGVGSGGLSKIITEQVELKTPHQKCISAVTSWLLGTLLINAFGGKSEGKSPL 1106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0907 1106 SFLD p-type atpase 380 649 IPR044492 -
Lele22g0907 1106 SUPERFAMILY Calcium ATPase, transmembrane domain M 148 391 IPR023298 -
Lele22g0907 1106 ProSitePatterns E1-E2 ATPases phosphorylation site. 399 405 IPR018303 -
Lele22g0907 1106 ProSiteProfiles Heavy-metal-associated domain profile. 13 79 IPR006121 GO:0046872
Lele22g0907 1106 TIGRFAM ATPase-IB2_Cd: cadmium-translocating P-type ATPase 148 489 - -
Lele22g0907 1106 MobiDBLite consensus disorder prediction 723 751 - -
Lele22g0907 1106 Pfam E1-E2 ATPase 200 375 - -
Lele22g0907 1106 SUPERFAMILY Calcium ATPase, transduction domain A 205 296 IPR008250 -
Lele22g0907 1106 FunFam Putative cadmium/zinc-transporting ATPase 3 408 529 - -
Lele22g0907 1106 Gene3D - 8 81 - -
Lele22g0907 1106 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 148 700 IPR027256 GO:0006812|GO:0016020|GO:0019829
Lele22g0907 1106 Gene3D - 185 300 - -
Lele22g0907 1106 PRINTS P-type cation-transporting ATPase superfamily signature 543 553 - -
Lele22g0907 1106 PRINTS P-type cation-transporting ATPase superfamily signature 621 633 - -
Lele22g0907 1106 PRINTS P-type cation-transporting ATPase superfamily signature 397 411 - -
Lele22g0907 1106 PRINTS P-type cation-transporting ATPase superfamily signature 597 616 - -
Lele22g0907 1106 PRINTS P-type cation-transporting ATPase superfamily signature 521 532 - -
Lele22g0907 1106 PRINTS P-type cation-transporting ATPase superfamily signature 246 260 - -
Lele22g0907 1106 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 171 675 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele22g0907 1106 PRINTS H+-transporting ATPase (proton pump) signature 597 613 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele22g0907 1106 PRINTS H+-transporting ATPase (proton pump) signature 629 654 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele22g0907 1106 MobiDBLite consensus disorder prediction 728 749 - -
Lele22g0907 1106 Gene3D - 388 648 IPR023214 -
Lele22g0907 1106 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 9 703 - -
Lele22g0907 1106 Gene3D - 408 529 IPR023299 GO:0000166
Lele22g0907 1106 FunFam Putative cadmium/zinc-transporting ATPase 3 8 81 - -
Lele22g0907 1106 Pfam haloacid dehalogenase-like hydrolase 393 611 - -
Lele22g0907 1106 SFLD C1.7: P-type atpase like 380 649 - -
Lele22g0907 1106 SUPERFAMILY HAD-like 396 698 IPR036412 -
Lele22g0907 1106 FunFam Copper-transporting ATPase 1, putative 186 300 - -
Lele22g0907 1106 SUPERFAMILY HMA, heavy metal-associated domain 9 79 IPR036163 GO:0046872
Lele22g0907 1106 CDD P-type_ATPase_HM 99 699 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0907 Lele-ChrLele22 6184817 6193504 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0907 9 716 Primary Pumps ATPases AT4G30110 69.958 0.0 1044
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g0907 22 6184817 6193504 Lele17g0713 17 18874016 18875837 CCT
Lele22g0907 22 6184817 6193504 Lele18g0809 18 5083798 5085433 CCT
Lele22g0907 22 6184817 6193504 Lele19g0844 19 5109224 5110340 CCT
Lele22g0907 22 6184817 6193504 Lele20g0614 20 13445502 13447118 CCT
Lele22g0907 22 6184817 6193504 Lele22g0907 22 6184817 6193504 ECH
Lele22g0907 22 6184817 6193504 Lele24g0882 24 6077771 6085217 hybridization