Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0900 ATGATTCTCGTTTACGCGCAATTTCTTCGTCAAATGGGTGCTTCTTGGTGTCTGCAGGCCAGAAAAAGAATTGTAGTTATCGCTGACAGGAGAGAAAATCCAAAAATAAAGAAAGAGATTAACTACGGGCGGGGCGGGGATATCGGGAATCTCAAAGCATCAAATGTAAGCAAAAGCAAGGAGGAAGCAAAAGTGTTCCTGACGAAGCCATTCTCATTAGGAGACGCGGATACGGCTTTTAGGGCCCCTAATCTCTTGCAACGTATATTAAGCCTTTTTAAGAATATACGGCCTGGATCTGATCTCTCTCACTTCCAACTGCCGCCTCTGTTCAATTTTCCAAAGTCACAACTTCAGTGCTATGGTGAGTCTGTATATTGCACAGCTTCAGACTTGCTAGGCAAGTGCAACAGAGAGCAGAATCCAGTGGATAGGTTCACATCTGTGGTTGCATGGTGCATCTCTACTACTCGCCCTACACTTTTACTTGCTCCTTATAACCCCATTCTTGGAGAGACCCACCATGCTTCAAGGAGAAATCTCAACGTCCTGCTTGAACAGGTTTCACACCATCCTCCCGTATCTGCCCTACATGCAACGGATGAGAAGGAGAACATAGAGATGACATGGTGCCAACAACCTAGTCCAAAGTTTTATGGCACTTCAGTGGAGGCTCAAGTTCTTGGTAAACGGCAGCTGAAGCTCCTGAATCATGGAGAAACCTATGAAATGAATTGTCCTCACCTCCAAATCAGAATTCTTCCGGTCCCTGACGTTGATTGGGTTGGAAATGTTAATATTCGGTGTCGAGAGACTGGTCTGGTGGCAGAGTTAAGCTACAAAAGTAATTCTTTTCTGGGATTTGGGGGGAACGGTAGATTGATCAAAGGGAAGATCCTCAATTCATCGTCATCAAAAGTTCTTTATGAAGTGAATGGTCATTGGGATAGAACTGTGACAATAAAGGACACAAGTAATAGGAAGGTTAAAGTGATATATGATGCAAATGAAGTCATTTCAAGGCTCCAAACTCCAATCGTCTGCGAACCAAAGTGTGTGAAGCCAACAGAGTCAGCCCTGGTTTGGGGTGAGCTTAGCGAAGCCATAATGAACAAAGAATGGGAGAAAGCGAGAGAAGCAAAGAATGCTGTGGAGGAAAGACAGAGGAAACTGACGAGAGAAAGAGAATCAAGAGGAGAAAATTGGATTCCTAAACATTTTCTTGTGTTTCATAGCAAAGAAGGTGGCTGGGAATGCTCACCCATTGAGAAGTGGGTCCCCTCTGCCCCCATTGTTGCCCTGTAA 1305 0.446 MILVYAQFLRQMGASWCLQARKRIVVIADRRENPKIKKEINYGRGGDIGNLKASNVSKSKEEAKVFLTKPFSLGDADTAFRAPNLLQRILSLFKNIRPGSDLSHFQLPPLFNFPKSQLQCYGESVYCTASDLLGKCNREQNPVDRFTSVVAWCISTTRPTLLLAPYNPILGETHHASRRNLNVLLEQVSHHPPVSALHATDEKENIEMTWCQQPSPKFYGTSVEAQVLGKRQLKLLNHGETYEMNCPHLQIRILPVPDVDWVGNVNIRCRETGLVAELSYKSNSFLGFGGNGRLIKGKILNSSSSKVLYEVNGHWDRTVTIKDTSNRKVKVIYDANEVISRLQTPIVCEPKCVKPTESALVWGELSEAIMNKEWEKAREAKNAVEERQRKLTRERESRGENWIPKHFLVFHSKEGGWECSPIEKWVPSAPIVAL 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0900 434 ProSitePatterns Oxysterol-binding protein family signature. 186 196 IPR018494 -
Lele22g0900 434 FunFam Oxysterol-binding protein-related protein 4B 354 426 - -
Lele22g0900 434 Pfam Oxysterol-binding protein 93 362 IPR000648 GO:0008289
Lele22g0900 434 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 89 407 IPR000648 GO:0008289
Lele22g0900 434 Gene3D - 170 347 - -
Lele22g0900 434 Gene3D - 354 424 - -
Lele22g0900 434 FunFam Oxysterol-binding protein-related protein 4C 169 346 - -
Lele22g0900 434 SUPERFAMILY Oxysterol-binding protein-like 87 419 IPR037239 -
Lele22g0900 434 Coils Coil 374 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0900 Lele-ChrLele22 6108012 6112098 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g0900 22 6108012 6112098 Lele17g0548 17 17636307 17640305 CCT
Lele22g0900 22 6108012 6112098 Lele19g0990 19 6256809 6266229 CCT
Lele22g0900 22 6108012 6112098 Lele20g0454 20 12228118 12231715 CCT
Lele17g0534 17 17506586 17509042 Lele22g0900 22 6108012 6112098 CCT
Lele22g0900 22 6108012 6112098 Lele23g1152 23 17058979 17063012 hybridization
Lele22g0900 22 6108012 6112098 Lele24g0873 24 5993335 5997321 hybridization