Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0879 ATGGTTACGGCAATTTATGTTAATAAAAGGACGAGTGAGATGATGATGATGATGAAGAGAGGCAGGAGGAGCAATCGGCAATATTTTCTTAGGGTAAACCAGCAAATTAAAGCGGTTTTATGTATCCATTTGTTTCAGCAGAGAGGATCAGGAAGAGCAACTAGAAAGATCAATATGGGAAACTGTCTGGCTCGTCAATCTGATTCTCCAGATTCTCATCGCAACTTCAACAATGGCGCCAACAACAACCAATCGGGGAGCAGCCAATTACCCCTTAGACACAGTAATTCGAGACTCTTGCAGAGTACAAGCAATTCCACTTTGCTTGGACAAAGCAGCACATCTGTCGGAAACAGCAGGCTATTTGGACCAAGTAGCAGTAACACATACACAACCAGCAATACTAATTCATCTCTCTTAGGCTCTGATATCAGCCAAACTTTGGAAGTAAGAGGTGAAGAGGAGTTTCCTAATGGGACGATCTTGGATGTGGCAAACCTGATAGATTTCACTCTTGAGGAACTTAAGGCAGCAACTCGAAATTTCAGAGCTGACTCTGTAGTGGGAGAGGGAGGCTTTGGCAGAGTATACAAGGGTTTGCTGAACGGGGGAGCACCATCAAGAACTACAAGAGATGGGCGATTGGCTGTCGCCATCAAGAGCTTGAACTCTCATAGCACACAAGGATTTACGGAATGGCAGTCAGAGGTGAATTTCTTAGGAAGGCTTTCCCATCCTAACCTTGTCAAGTTGTTTGGATTTGGAAGGGATAATAGAGAGTTATTTCTCGTGTATGAATTCATGCACAAAGGCAGCTTGGCTAACCACCTATTCGGAAGAGGTTCAAATGTGCAGCCACTTCCATGGGACACAAGGTTAAAGATTATAATTGGAGCAGCTAGGGGCCTAGACTTCTTACACTCGTTAGAGAATAAAATCATATACAGAGATTTTAAGCCAGCCAATATCCTACTTGACAAGAACTACATTGCCAAATTATCAGACTTCGGTTTGGCCAAAGCGTTTCCTTCTGATGATAGAACTCATGTGACAACAAGGGTTATGGGAACTTACGGTTATGCTGCGCCTGAGTACATTGCCACAGGTCACTTGACTGTGAAAAGTGATGTATATGGATTTGGAATTGTTTTGGTGGAGATACTGACAGGCAAATCAATACATGATATACGTAAGCATATGGGTGAGGGCCAATCATTGATCAATTGGCTCAAATCAAATTTGTTGAGTAAAGGGAAGATGATAAACACAATGGACAGTAGATTGCAGGGGAGATATCCACCTAAGCTAGCATTACAAGTAGCTCACCTTGCTCATAAATGTGTCCAAACGGAACATAAATTCAGGCCATCAATGAGGGAAGTCGTCGAGACATTGGAAAAAGTAGAGGCATCAAGTGACAAAACAACTGATACCAGAAAACGCGCCACTCATTCTGGGGCAGCTCAAAGCCATGGTGGCCCTGATGGAGATAAGAACCTAATGATGAGATCAGTCAAAGGACATGTTTGGAAAGGCCATGATTTCTTGGAGCGAATCGATGACAGATAG 1569 0.4315 MVTAIYVNKRTSEMMMMMKRGRRSNRQYFLRVNQQIKAVLCIHLFQQRGSGRATRKINMGNCLARQSDSPDSHRNFNNGANNNQSGSSQLPLRHSNSRLLQSTSNSTLLGQSSTSVGNSRLFGPSSSNTYTTSNTNSSLLGSDISQTLEVRGEEEFPNGTILDVANLIDFTLEELKAATRNFRADSVVGEGGFGRVYKGLLNGGAPSRTTRDGRLAVAIKSLNSHSTQGFTEWQSEVNFLGRLSHPNLVKLFGFGRDNRELFLVYEFMHKGSLANHLFGRGSNVQPLPWDTRLKIIIGAARGLDFLHSLENKIIYRDFKPANILLDKNYIAKLSDFGLAKAFPSDDRTHVTTRVMGTYGYAAPEYIATGHLTVKSDVYGFGIVLVEILTGKSIHDIRKHMGEGQSLINWLKSNLLSKGKMINTMDSRLQGRYPPKLALQVAHLAHKCVQTEHKFRPSMREVVETLEKVEASSDKTTDTRKRATHSGAAQSHGGPDGDKNLMMRSVKGHVWKGHDFLERIDDR 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0879 522 MobiDBLite consensus disorder prediction 106 138 - -
Lele22g0879 522 FunFam PTI1-like tyrosine-protein kinase 3 268 479 - -
Lele22g0879 522 Pfam Protein tyrosine and serine/threonine kinase 185 465 IPR001245 GO:0004672|GO:0006468
Lele22g0879 522 Gene3D Transferase(Phosphotransferase) domain 1 268 491 - -
Lele22g0879 522 ProSiteProfiles Protein kinase domain profile. 182 468 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g0879 522 ProSitePatterns Protein kinases ATP-binding region signature. 188 220 IPR017441 GO:0005524
Lele22g0879 522 Gene3D Phosphorylase Kinase; domain 1 167 267 - -
Lele22g0879 522 PANTHER OS01G0588500 PROTEIN-RELATED 116 469 - -
Lele22g0879 522 SUPERFAMILY Protein kinase-like (PK-like) 168 466 IPR011009 -
Lele22g0879 522 MobiDBLite consensus disorder prediction 466 501 - -
Lele22g0879 522 ProSitePatterns Serine/Threonine protein kinases active-site signature. 313 325 IPR008271 GO:0004672|GO:0006468
Lele22g0879 522 MobiDBLite consensus disorder prediction 466 481 - -
Lele22g0879 522 MobiDBLite consensus disorder prediction 64 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0879 Lele-ChrLele22 5933718 5936946 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0879 170 465 Receptor kinase-like Gene Family AT3G58690 47.000 5.90e-85 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele22g0879 PK_Tyr_Ser-Thr 1.3e-47 CL0016