Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0872 ATGAATCGCTTGAAGAATTCGCCTCGTCACCAGAGTGACATTGAGGCCGGAAGTAGCAGCCACGGCGATCATGACGACGTGGAAAGTTCGTCTGATCCATTTGTTATTCCCAGAACAAAGGATGCTCCTATTGAACGCCTCAAACGTTGGAGGCAAGCTGCACTTGTGCTTAATACTTCTCGTCGGTTCCGTTACACGCTGGACTTGAAAAAAGAAGAGGAGAATCGACAAATATTGGGGAAAGTTAGGGCTCATGTGGAAGCAATTAGAGCTGCATATCTGTTCAAAGGTGCTATAAACGGGGGGAATGGAATCACACCTCCTCCTCCAACCTCAGGCGGCGACTTCGGTATCGGAAATGAACAACTTCTTTCAATTTCTAGGGATCATAAAGTTGATGTTCTCGAACAATATGGCGGGGCTAGAGGGCTATCAGAATTGTTGAAATCTAGTACAGAGAAGGGGATTATTGGTGATGATGCAGATCTATTAAAACGAAGGACTGCTTTTGGTTCAAACAATTATCCTCGAAAGAAAGGAAGGGGTTTCCTGATGTTTATGTGGGATGCTTGCAAGGACCTTACCTTGGTTATATTAATGGTAGCTGCAGCAGCTTCATTAGCACTAGGAATAAAATCTGAGGTGAGATTGACCAGAAAGTTATTTAGCATTCTTTGTGCTCATATTGCTGAAGAATGTAGTAAATCTTGGTAG 714 0.4356 MNRLKNSPRHQSDIEAGSSSHGDHDDVESSSDPFVIPRTKDAPIERLKRWRQAALVLNTSRRFRYTLDLKKEEENRQILGKVRAHVEAIRAAYLFKGAINGGNGITPPPPTSGGDFGIGNEQLLSISRDHKVDVLEQYGGARGLSELLKSSTEKGIIGDDADLLKRRTAFGSNNYPRKKGRGFLMFMWDACKDLTLVILMVAAAASLALGIKSEVRLTRKLFSILCAHIAEECSKSW 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0872 237 SUPERFAMILY Calcium ATPase, transmembrane domain M 138 210 IPR023298 -
Lele22g0872 237 Pfam Cation transporter/ATPase, N-terminus 139 206 IPR004014 -
Lele22g0872 237 PANTHER CATION TRANSPORTING ATPASE 80 214 - -
Lele22g0872 237 Pfam Ca2+-ATPase N terminal autoinhibitory domain 32 74 IPR024750 GO:0005516
Lele22g0872 237 FunFam Calcium-transporting ATPase 42 98 - -
Lele22g0872 237 MobiDBLite consensus disorder prediction 1 38 - -
Lele22g0872 237 Gene3D - 43 97 - -
Lele22g0872 237 MobiDBLite consensus disorder prediction 1 31 - -
Lele22g0872 237 SMART Cation_ATPase_N_a_2 138 211 IPR004014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0872 Lele-ChrLele22 5866893 5868889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0872 3 214 Primary Pumps ATPases AT4G29900 61.682 3.99e-83 266