Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0867 ATGGAGAATATAGGCGAAGAGTATAGGCATTACTGGGAAACCAACATGTTCCTTCAAACCGAAGAGCTCGACAGTTGGGGATGGGACGAGGCTTTCTCCGGTTACTACGATTCCAGCTCCCCCGACGGCGCTGCGTCCTCCGCCGCCTCCAAGAACATTGTCTCCGAGCGAAACCGCCGCAAGAAGCTCAACGATAGACTCTTCGCTCTCAGAGCCGTCGTCCCCAACATTAGCAAGATGGACAAGGCTTCCATAATTAAGGACGCAATCGATTACATCCAATACTTGCACGAACAGGAGAGGAATATCGAGGCTGAGCTATCGGAGCTTGAATCTGGGAAGCAGATGAAGCAGAACTCGAGCGATGTCGATTACGAGCAAGACCTCCACGTCTTGCTCCGATCCAAGAAGAAGAAAACAGAGCAGCAGCTTTACGATCCTGCCGTCAGTTCAAGAAGTTGCCCGATCGAAGTCCATGAGCTGAAGGTAACATACATGGGAGAGAAGACGATCGTGGTGAGTTTGACGTGTAGTAAAAGGACAAACACAATGGTGAAACTGTGCGAAGTGTTCGAATCTCTGAAGCTGAAGATCGTAACGGCCAACATAACTTGTTTCTCAGGCAGGCTCGTAAAGACGGTCTTCGTCGAGGCAGACGAAGAAGAGAAAGATCTCTTGGAGATAAAAATCAAAACGGCCATTGCAGCTCTTAATGATCCTGATAGCCCTATGAGCATCTAA 741 0.4912 MENIGEEYRHYWETNMFLQTEELDSWGWDEAFSGYYDSSSPDGAASSAASKNIVSERNRRKKLNDRLFALRAVVPNISKMDKASIIKDAIDYIQYLHEQERNIEAELSELESGKQMKQNSSDVDYEQDLHVLLRSKKKKTEQQLYDPAVSSRSCPIEVHELKVTYMGEKTIVVSLTCSKRTNTMVKLCEVFESLKLKIVTANITCFSGRLVKTVFVEADEEEKDLLEIKIKTAIAALNDPDSPMSI 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0867 246 Pfam Helix-loop-helix DNA-binding domain 54 97 IPR011598 GO:0046983
Lele22g0867 246 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 47 96 IPR011598 GO:0046983
Lele22g0867 246 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 48 112 IPR036638 GO:0046983
Lele22g0867 246 FunFam Basic helix-loop-helix (BHLH) DNA-binding superfamily protein 43 115 - -
Lele22g0867 246 SMART finulus 53 102 IPR011598 GO:0046983
Lele22g0867 246 Coils Coil 216 236 - -
Lele22g0867 246 Gene3D - 44 113 IPR036638 GO:0046983
Lele22g0867 246 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 46 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0867 Lele-ChrLele22 5791866 5801571 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0867 1 217 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G57150 62.273 3.02e-84 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele22g0867 HLH 3.5e-12 No_clan