Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0854 ATGGCTCGGGACGGGAGCGTTGTGCCTGCCGACCCGCAGGCTCTGCATGTCAAAGCAATTATCACTGCTGAAGAGGTATTGCTGAGAGATCCAACAGATGAAAATGTGGTCCCTGTTGTTGAGGAACTTCAAAGACGGCTGCCTGATGCAAGTGCCAATAATCTCCAAAGAGGAGATCGTAAAGAGTATGACATGGAAGCAGCTGAGGAAGATGAGTCACCCTTTGAATTCCGTGCCTTGGAGGTAGCTTTAGAAGCCATTTGTAGTTTCCTTGCTGCACGTACAACAGAATTGGAGATGGCTGCTTATCCTGCATTAGATGAACTTACCTCCAAGATTAGTAGTCGTAATTTGGAGAGGGTTCGTAAACTAAAAAGTGCAATGACTAGATTGACTGCTAGGGTTCAAAAGCTCAGTTGGCTGACCCTTTTCTCTCCTCAACTCAACATTGAAAGTGAAGAAGGCACCCTTCATCCCAACAACATGGGGAATTCACATGAGAATGGTGCTTGTGTTGATTCTCATGATTTGTCAAAGCACTATGACGTGGTTAGTGAAGGCTACCACAGTTCCTTTGACCACCATGGTCCAAAAGTTAGAGACGAGCTAGAACAATTACTGGATGATGATGATGACATGGCTGACCTATACTTGTCAAGAAAGTTAGGCTCATCTTCGCCAGTTAGTGGGTCAGGTCCTGCCAATTGGTTTCCTGCCTCCCCCACCATTGGATCAAAGATATCCAGAGCGAGTAGAGCAAGTGTAGCAACAATGCGTGGTGATGAAGATAATGTGGAGGAGCTTGAAATGTTACTGGAGGCTTACTTCATGCAAATTGATGGCACATTGAACAAATTATCTACGCTCCGGGAGTACATTGATGATACAGAAGATTACATTAATATTCAGCTTGACAACCATCGTAATCAGCTTATTCAGTTAGAGCTCTTTCTGAGTTCAGGAACTGTCTGTCTATCTGTCTATTCTTTGGTGGCTGGAATATTTGGCATGAATATCCCCTACACTTGGAACGACCACCATGGTTACATGTTCAAATGGGTAGTTATTGTCACGGGATTATTCTGTCTAACTATGTTTATCTGCATAATAGCATATGCTCGTAAAAAGGGGTTAGTAGGATCATGA 1146 0.438 MARDGSVVPADPQALHVKAIITAEEVLLRDPTDENVVPVVEELQRRLPDASANNLQRGDRKEYDMEAAEEDESPFEFRALEVALEAICSFLAARTTELEMAAYPALDELTSKISSRNLERVRKLKSAMTRLTARVQKLSWLTLFSPQLNIESEEGTLHPNNMGNSHENGACVDSHDLSKHYDVVSEGYHSSFDHHGPKVRDELEQLLDDDDDMADLYLSRKLGSSSPVSGSGPANWFPASPTIGSKISRASRASVATMRGDEDNVEELEMLLEAYFMQIDGTLNKLSTLREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCLSVYSLVAGIFGMNIPYTWNDHHGYMFKWVVIVTGLFCLTMFICIIAYARKKGLVGS 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0854 381 Gene3D Magnesium transport protein CorA, transmembrane region 318 377 - -
Lele22g0854 381 Gene3D Magnesium transport protein CorA, transmembrane region 183 311 - -
Lele22g0854 381 Pfam CorA-like Mg2+ transporter protein 263 369 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Lele22g0854 381 CDD Mrs2_Mfm1p-like 15 378 IPR039204 -
Lele22g0854 381 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 317 368 IPR045863 -
Lele22g0854 381 Gene3D Magnesium transport protein CorA, transmembrane region 35 140 - -
Lele22g0854 381 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 14 379 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0854 Lele-ChrLele22 5677035 5683565 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0854 232 354 MRS2 Gene Family AT5G64560 86.179 4.79e-73 230