Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0850 ATGGATTTGGAACCAGAAGGAGCTAAGGATTCAAAGATGAAGGTCATTGGAAATCATAGCAGCAAGGATATGATATTTAGAGCAGATAAGATTGATCTGAAAAGTTTGGATGCTCAGTTAGAAAAGCACTTAACCAAAGTCTGGTCGAGGAAATCTGAGCAGGAGAGGCCAAAAGAAGAGTGGGAGATTGATTTAGCGAAATTGGATATTCGATATGCTTTTGCTCATGGAGCTTATGGTACTGTCTATAGAGGCACCTATGATAGCCAAGATGTTGCAGTGAAAATATTGGACTGGGGTGAGGATGGTGTCACCACAGCAGCCGAAACTGCTGCTTTACGTGCATCCTTTCGGCAGGAGGTTGCTGTCTGGCACAAACTTGACCACCCAAATGTCACAAAATTTATTGGAGCATCAATGGGAACTTCAAATCTCAAGATTCCGGCAAATAACTCTTCAACTAATGGGGCATATCCTCCTCCATCTAGGGCATGTTGTGTTGTTGTTGAGTATCTTCCTGGTGGGACATTGAAACAATTCTTATTCAGAAATAGGAGGAAGAAACTTGCTTTTAAGGTTGTGGTCCAGCTGGCGTTGGACCTTTCCAGAGGACTTAGCTATCTACACTCGAAGAAGATTGTACATCGTGACGTCAAAGCAGAAAATATGTTGCTAGATGGACTTAAACGTTTGAAAATAGCCGATTTCGGAGTTGCTCGTGTTGAAGCTATGAATCCGAGTGACATGACAGGCGAAACTGGAACCCTCGGTTACATGGCACCAGAGGTTCTGGAGGGCAAGCCTTACAACCATAGATGTGATGTGTACAGCTTTGGCATTTGCTTGTGGGAAATTTACTGCTGTGACATGCCCTATCCAGATCTTAGCTTTGCCGATGTTTCAGCCGCAGTTGTTCGTCAGAATCTGAGGCCGGAGATTCCAAGATGTTGTCCGAGCTCATTTGCGAATATAATGAGGAAGTGTTGGGATGGGAATCCAAACAAGAGGCCAGAGATGGAAGAAGTGGTGAGAATGCTGGAAGCAGTGGATACCAGCAAAGGAGGAGGCATGATTCCTGAAGATCATACCCCTAACTGCTTCTGTTTTGCACCTGTTCGCATTTCTTCTCGGCCATCTTCTCTTATTCTGGCTTTACCTTCCCTTTTTGTATTTAAGAAAGAAAAAGAAAAAGAGCATACATGGTCAAGTTCTGAGATAGATCCACCTTTCACATTTCCAAACTCTTCATTTATATTCTTCTCTGAATTTGGGATTGTTCGTGTTTCTTTTTGCAGAGGCGACTGCGGCGATGCAGTTACGGTGCAGACGCTGAAAGATTTCCCCAGGAGACGACTCCAGATCCTTGCGGACTCTGATCCTGACTTGATTGCATCGAAACCATTCCAAACAAACTCGAAGATCAGCAAGGTGGTTAGTGGTGATTCCATCTCGGAGTGTGCCTCCATTGCGGAATCATGCGAGCGAGTTGCTGCAATTGGAAAATCAAGTGAAGCGGGAGATGAAGATTTTGTGTCTTACGCGGTAAAGTGGCGTGATGCTGGTGCTTCCCTCTTTGGTGGAAGTTGCAGGACTACTCCTAATACTATCAAAGCCATAACTAAGGCATTGTCTGCAAAAGCTCATCTTAAGAAAGGAACATTTGAATGA 1668 0.4424 MDLEPEGAKDSKMKVIGNHSSKDMIFRADKIDLKSLDAQLEKHLTKVWSRKSEQERPKEEWEIDLAKLDIRYAFAHGAYGTVYRGTYDSQDVAVKILDWGEDGVTTAAETAALRASFRQEVAVWHKLDHPNVTKFIGASMGTSNLKIPANNSSTNGAYPPPSRACCVVVEYLPGGTLKQFLFRNRRKKLAFKVVVQLALDLSRGLSYLHSKKIVHRDVKAENMLLDGLKRLKIADFGVARVEAMNPSDMTGETGTLGYMAPEVLEGKPYNHRCDVYSFGICLWEIYCCDMPYPDLSFADVSAAVVRQNLRPEIPRCCPSSFANIMRKCWDGNPNKRPEMEEVVRMLEAVDTSKGGGMIPEDHTPNCFCFAPVRISSRPSSLILALPSLFVFKKEKEKEHTWSSSEIDPPFTFPNSSFIFFSEFGIVRVSFCRGDCGDAVTVQTLKDFPRRRLQILADSDPDLIASKPFQTNSKISKVVSGDSISECASIAESCERVAAIGKSSEAGDEDFVSYAVKWRDAGASLFGGSCRTTPNTIKAITKALSAKAHLKKGTFE 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0850 555 Gene3D Phosphorylase Kinase; domain 1 57 150 - -
Lele22g0850 555 ProSiteProfiles Protein kinase domain profile. 68 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g0850 555 CDD STKc_MAP3K-like 75 346 - -
Lele22g0850 555 SUPERFAMILY Protein kinase-like (PK-like) 51 346 IPR011009 -
Lele22g0850 555 Gene3D - 492 554 IPR036589 -
Lele22g0850 555 SMART serkin_6 68 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g0850 555 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 59 349 - -
Lele22g0850 555 FunFam Kinase suppressor of Ras 1 57 152 - -
Lele22g0850 555 Pfam Protein tyrosine and serine/threonine kinase 73 346 IPR001245 GO:0004672|GO:0006468
Lele22g0850 555 PRINTS Tyrosine kinase catalytic domain signature 207 225 IPR001245 GO:0004672|GO:0006468
Lele22g0850 555 PRINTS Tyrosine kinase catalytic domain signature 169 182 IPR001245 GO:0004672|GO:0006468
Lele22g0850 555 PRINTS Tyrosine kinase catalytic domain signature 317 339 IPR001245 GO:0004672|GO:0006468
Lele22g0850 555 PRINTS Tyrosine kinase catalytic domain signature 273 295 IPR001245 GO:0004672|GO:0006468
Lele22g0850 555 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
Lele22g0850 555 Gene3D Transferase(Phosphotransferase) domain 1 174 357 - -
Lele22g0850 555 Pfam Homocysteine S-methyltransferase 500 543 IPR003726 -
Lele22g0850 555 FunFam Serine/threonine-protein kinase HT1 172 357 - -
Lele22g0850 555 SUPERFAMILY Homocysteine S-methyltransferase 439 546 IPR036589 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0850 Lele-ChrLele22 5652106 5658649 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0850 17 373 MAP Kinase Kinase Kinase AT3G22750 78.771 0.0 609
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lele22g0850 PK_Tyr_Ser-Thr 2e-58 CL0016