Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0831 ATGCTTACGTGCATAGCTCGTCCCAAGAAACCCGGGAGTGACTCGCTGAGTCAGCCCGATGATTCAGATGCTAAAAACCAAGCCATCAAACCCCTTACTTCTCAGCTTAAGGATATGGCGTTGAAAGCATCGGGAGCGTACAAGCATTGTAGCCCCTGCACGGGGCCGACCACGCAGACTCGGCTCCGGAGCAATATCGAGTCAGACACGGATTCGGATCGCTTCCGGTGGTCGTATCGGAGAACAGGGAGCTCAAGCTCGACGACGACGAGGACATGGGGGAAGGAGATGGAAGCGAGGCTCAAGGGGATTTCGAGTGGAGAAGGGACGCCGAATTCGTCCAGTGGACGGCGAGTAGAGCCGGTGGTGTTGTTCGTGGAAGAGAACGAACCCAAGGAGTGGGTGGCGCAGGTACGTACGCCTCCAATTCTTCTTTTCTCTGTTCCTGTTTGGAATCGGGCAGGCATGAACCGTCGTGTGGTGGTTCTTTTCGATGTCGCTGTCGTCTCATCGACGGCGACTGTGCCCTGCGTTTACAGTGTTGGTCAAGATGGGACCCTAAAGCATCTGGATCGTGATCATGACATTGAGCGCCTTTTGGACTGTCAATTTCTGTGGGGACCACATTCCCCCAGTATTTTCACGCCATTGCCAAAAGCAATCCAAAAAGAGGTCCCAAAAGGAGACCTTATTGAGGCTTTTGTTAGTGGAGGTGGTCGCGAGATGTTTAACAAATGGCAAGCTCAAAGATGGTGGGCAGAGAACTACGACAAAGTTATGGAACTTTACAACGTTCGAAGATTTAACCGCCAAGCTTTCCCTCTTCCCACGCCCCCAAGATCCGAAGATGAGAGCTCAAAGATTGAATCCGCGGAAGACAGCCCAGTGACACCTCCGCTGACTAGGGAACGTTTACCTCGTAATTTGCACCGTCCTACAGGAATGGGAATGGGATACTCATCCTCTGATTCATTTGATCATCAATCCATGCAATCCCGGCATCCCTATGACTCTTATGGCATGAACTCAACCCCTAAAGTTTCCACCATTAGCGCAGCCAAGACAGAAATGTCATCAATGGACGCCTCCATGAGAAGTAGCTCATCCCGAGAAGCTGATCGCTCCGCGGATTTTTCAATCAGCAATGCCAGCGATCTGGAGACTGAATGGGTTGAGCAAGATGAACCTGGGGTTTATATCACCATTAGAGCATTACCGGGTGGCAAAAGGGAGCTCAGAAGAGTCAGATTCAGCCGAGAAAAATTTGGGGAGATGCATGCTAGATTATGGTGGGAAGAGAACCGCCCCAGAATACATGAACAATACTTGTTATTGTGTCGGATGCGGGTGGGGAAGTTAACTTATATTAGTTACTTGTCTCAGATATTGGCGAATGAAAAGAGCATAGTTAAGAAGTGTGGTGGTGGTGGGGACTCTGGCTTGTATTGCCCTAGATTTTCTCTGTACATTTGGTCTCTTTTCCTGCGAAATCTGCATGCCTCAAACATAAATAGAAGGGGTAGATCGATGATGCGAGATGAGTCGTACCCACGAAGCAGAAGGACCCCATCTTTCTCTTCCTCTCTCCTTGACGCCATTTACCGTTCCACCGACCAATCAAAGTCAGACCTTGATGAATATTCAAGATTGGGTCTCTGCAAGGAAGTTCAGTACACAACGAAACAGAGCAATCTCAGTCACAACAACAACGACATAGGAGTTTCTCTGGGAAATTATGAATATGGCAGAGTCAGGGATATGAATCATCGTCCTCGCAGAACAGTTATGGTTGAAGATTGGATGGAGAAACAGAGTTCCTACAGCTCTTCTGAGTGCTACAGTTCAGGAGTATTCTTCTCGTCGTCGGAGACAGAGACGAGCTGCAAACAGAGATCGAGGTTTACTAAATCCGACAAGCAAAAGAAACAGAAAGTGAAGCAGCCAATGTCACCGGGAAGTCGAATATCTAGCTTTTTGAGCTCTCTCTTCAGCTATGGAAGCGTGAAGAAGGCGAAAATGTGCTACGTTGGGGCAGTGGAAGATGTTAATTTCGAGCAGAAATCTCAGTCTCCATGTGTTTCTTCCTCTGCTTCTTCATATTCAAGGAGGTCTTGCATGAGCAAAACGCCATCTTCGACGAAGAAGAACAATGGCGTCAAGAGGTCCGTGAGATTTTACCCTGTAAGCATGATTCTGGGCGAGGATTCTCACCACAAATTTGTCTACGAGAATGATCCAGATATAATGCCGTTGCCTAGTGGTGTAGGAAAACTCAAAACAAGATCTTCAACAAAGGAGGAGAAGAAGAAGAGCTCTGTTTTGGCCAGAGAAAATGGCTCAATAAAGAGTAGTGAGTTTGATTTCAGAGTGTTGTACAATCATAATGGTGAGGATGCAGAACATGAAGATGAAGATAATGATGCTTTGAGCTATTCAAGTTCGGATCTATTTGAGTTGGATCATCTGATTGGGGAAGAGCTTCCTGTTTATGAAACTACTAATCTGGAAACAAACAAGGCCATTGCAAATGGCTTACGTTTGTAA 2544 0.4725 MLTCIARPKKPGSDSLSQPDDSDAKNQAIKPLTSQLKDMALKASGAYKHCSPCTGPTTQTRLRSNIESDTDSDRFRWSYRRTGSSSSTTTRTWGKEMEARLKGISSGEGTPNSSSGRRVEPVVLFVEENEPKEWVAQVRTPPILLFSVPVWNRAGMNRRVVVLFDVAVVSSTATVPCVYSVGQDGTLKHLDRDHDIERLLDCQFLWGPHSPSIFTPLPKAIQKEVPKGDLIEAFVSGGGREMFNKWQAQRWWAENYDKVMELYNVRRFNRQAFPLPTPPRSEDESSKIESAEDSPVTPPLTRERLPRNLHRPTGMGMGYSSSDSFDHQSMQSRHPYDSYGMNSTPKVSTISAAKTEMSSMDASMRSSSSREADRSADFSISNASDLETEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHARLWWEENRPRIHEQYLLLCRMRVGKLTYISYLSQILANEKSIVKKCGGGGDSGLYCPRFSLYIWSLFLRNLHASNINRRGRSMMRDESYPRSRRTPSFSSSLLDAIYRSTDQSKSDLDEYSRLGLCKEVQYTTKQSNLSHNNNDIGVSLGNYEYGRVRDMNHRPRRTVMVEDWMEKQSSYSSSECYSSGVFFSSSETETSCKQRSRFTKSDKQKKQKVKQPMSPGSRISSFLSSLFSYGSVKKAKMCYVGAVEDVNFEQKSQSPCVSSSASSYSRRSCMSKTPSSTKKNNGVKRSVRFYPVSMILGEDSHHKFVYENDPDIMPLPSGVGKLKTRSSTKEEKKKSSVLARENGSIKSSEFDFRVLYNHNGEDAEHEDEDNDALSYSSSDLFELDHLIGEELPVYETTNLETNKAIANGLRL 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0831 847 MobiDBLite consensus disorder prediction 15 33 - -
Lele22g0831 847 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 443 IPR044532 -
Lele22g0831 847 MobiDBLite consensus disorder prediction 752 776 - -
Lele22g0831 847 MobiDBLite consensus disorder prediction 356 376 - -
Lele22g0831 847 MobiDBLite consensus disorder prediction 629 652 - -
Lele22g0831 847 MobiDBLite consensus disorder prediction 690 717 - -
Lele22g0831 847 MobiDBLite consensus disorder prediction 272 343 - -
Lele22g0831 847 Pfam Transcription factor regulating root and shoot growth via Pin3 387 442 IPR013591 -
Lele22g0831 847 Pfam Transcription factor regulating root and shoot growth via Pin3 240 263 IPR013591 -
Lele22g0831 847 MobiDBLite consensus disorder prediction 760 775 - -
Lele22g0831 847 Pfam Transcription factor BRX N-terminal domain 24 53 IPR027988 -
Lele22g0831 847 MobiDBLite consensus disorder prediction 315 343 - -
Lele22g0831 847 ProSiteProfiles BRX domain profile. 388 443 IPR013591 -
Lele22g0831 847 MobiDBLite consensus disorder prediction 1 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0831 Lele-ChrLele22 5496929 5506344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0831 240 443 Major Intrinsic Protein MIP AT1G31880 48.095 2.52e-49 176