Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0829 ATGGCTGACAACGTCCAAAGCCCCTCAACACTCTCACCTCCTCCTCCTCCTCCGTCGTCATCTTCTTCTTCTCCTTCCCCGAAACCCGGCATGACCATGCTGTACTACGGCCTGGCGGTGGTCGGAACCGCAGCCATAGTGTTAGCCATGTACAACCTCATCATCATCAGACGGTGCAGCCGAAGTCGCCGGCACGCACGAGGGATGACGGGGGACGATCGGGTGGTGGAGGTGGTGATCTCGGCGGCAGGAAGTAGTAGCCGGAGCTTTGAATGCTCGAACAGGAACTTGCTTTCAAGCTTCAAGTATAAGAAAGAAGCAGAAGAGAAGGAAGAAGGAGGAGGAGGAGGAAGAGGTGAGGAATATGAATGCCCAGTATGCTTATCGGTGTTTGAAGAAGGAGAAGAAGTGAGGAAGCTACCTCGCTGTAATCATTCGTTTCATGCGATTTGTATAGACATGTGGCTTTACTCTCACTTGGATTGCCCAATTTGTCGAACACCTGTTGGCACAACAGACTGA 522 0.5211 MADNVQSPSTLSPPPPPPSSSSSSPSPKPGMTMLYYGLAVVGTAAIVLAMYNLIIIRRCSRSRRHARGMTGDDRVVEVVISAAGSSSRSFECSNRNLLSSFKYKKEAEEKEEGGGGGRGEEYECPVCLSVFEEGEEVRKLPRCNHSFHAICIDMWLYSHLDCPICRTPVGTTD 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0829 173 ProSiteProfiles Zinc finger RING-type profile. 124 166 IPR001841 -
Lele22g0829 173 FunFam RING-H2 finger protein ATL1 77 171 - -
Lele22g0829 173 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 92 172 IPR013083 -
Lele22g0829 173 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 22 169 IPR044675 -
Lele22g0829 173 MobiDBLite consensus disorder prediction 9 24 - -
Lele22g0829 173 MobiDBLite consensus disorder prediction 1 27 - -
Lele22g0829 173 Pfam Ring finger domain 123 166 IPR001841 -
Lele22g0829 173 SUPERFAMILY RING/U-box 123 171 - -
Lele22g0829 173 SMART ring_2 124 165 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0829 Lele-ChrLele22 5486426 5486947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0829 15 166 C3H Transcription Factor Family AT3G10910 32.911 4.26e-20 80.9