Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0825 ATGGGAAGGAAGCCGTGTTGTGATAAAGAAGGTGTAAATAGAGGAACTTGGTCTGCGATGGAGGATCAGACCCTTGCCAACTTCGTTAAACTCCACGGAGAAGGAAAATGGAGGGACGTCCCTAAACGAGCAGGGTTGAATCGATGTGGAAAGAGTTGCAGACTTCGATGGTTGAACTATCTCAGGCCAGATATCAAGAGAGGAAACTTCTCTGAAGACGAAGAAGACCTCATTATCAGACTCCATAAGCTCCTTGGCAATAGGTGGTCACTGATCGCGGCAAGATTACCGGGACGAACGGATAATGATATCAAGAATTTCTGGAACACCAATTTGAGCAAGAGGGTTCGTCCAATCAATAATTATGCCCACAATAACAACAACAAACCCTCAGATCCTATCACAACCAAAACTCCGACCACCTCAGCACCTCCAACGTTAACATCTGCTCAACTCAACCCTGTGATTCGAGCGAAACCAGTCAGATGCACCAAGAAAATCATCTGGCCCGAATCCAATGCAGCAGAGTGGGAAACCCAGAAGAATACGACTGCTTCAGCATCCGACAGAGGACAAGGTTTTAAGAATGATTGTTTCTCTTCCTATGGTCTCCTCGAAGATTTTGACGTTGAGGGCTTGCTCGTACCAGAGGAACCACTAGTGCCTCATGATCAAAACATTGACGATGACGATGAAGTGAACAATAATATTGAATTTGAATCATGTGACTGCGAGAATCTCGGCGACAATATTAACGTTGGAGCTGAAGTCGGCGGCGTATTGGTGGATGAAATGAATCTTACTCATCAGAATTGGATGGTAGGGCAATCGTTGGAACCATCAGCAGATGATGAAGACGTGGATTTCTCTTTTCTAAATCTACTAAGTGACTCATTCATGGACTTATAG 909 0.4477 MGRKPCCDKEGVNRGTWSAMEDQTLANFVKLHGEGKWRDVPKRAGLNRCGKSCRLRWLNYLRPDIKRGNFSEDEEDLIIRLHKLLGNRWSLIAARLPGRTDNDIKNFWNTNLSKRVRPINNYAHNNNNKPSDPITTKTPTTSAPPTLTSAQLNPVIRAKPVRCTKKIIWPESNAAEWETQKNTTASASDRGQGFKNDCFSSYGLLEDFDVEGLLVPEEPLVPHDQNIDDDDEVNNNIEFESCDCENLGDNINVGAEVGGVLVDEMNLTHQNWMVGQSLEPSADDEDVDFSFLNLLSDSFMDL 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0825 302 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele22g0825 302 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Lele22g0825 302 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele22g0825 302 MobiDBLite consensus disorder prediction 120 148 - -
Lele22g0825 302 Gene3D - 68 138 - -
Lele22g0825 302 Gene3D - 14 66 - -
Lele22g0825 302 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele22g0825 302 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Lele22g0825 302 FunFam Transcription factor RAX3 7 67 - -
Lele22g0825 302 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 180 - -
Lele22g0825 302 CDD SANT 16 61 IPR001005 -
Lele22g0825 302 SMART sant 13 63 IPR001005 -
Lele22g0825 302 SMART sant 66 114 IPR001005 -
Lele22g0825 302 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lele22g0825 302 CDD SANT 69 112 IPR001005 -
Lele22g0825 302 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0825 Lele-ChrLele22 5451743 5454276 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0825 1 148 MYB Transcription Factor Family AT4G38620 54.601 6.35e-60 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele22g0825 Myb_DNA-binding 5.9e-16 CL0123