Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0822 ATGAACAAAGCCCACTTATTACGTACCCAAAAGGTCGGTTCTGCCAAGTTTCAGACTTGCAGGCTGCGTGCGCCATTACTGCTTCCACGTCTTGTAGGGTTTTTGTCAGTTGCCGTCAACTCTTCACGCACACTAAAGGTGAGGCTAAAGCAGAAATATCCACCGTCTTGTGCAAACAGGATAAAAAATATTCTTATGGATTCCGATGCTCCAAAACCTGCTGCTCCAAGGAAGGTGAAATTTGCACCAAAAGCTCCACCTCGTCGAGTGCCAAAGGCAGAAGTTAAAGCTGAAGTGGTTCATGATGAGGATGCTGTTCAGGCCAGGGACTTGCTGCGCCGTTTTAATGAGAGTTCAATGAGAACAAAGCCTAAGGTTGAGAAAAAAGTCTCAGCTTCGCAAATTGCTTTTGGTGTTGGAGGTTCTTCAGCTTCAATCAAAACATATGGTACTTCCTGGGGTGCAAGTGGTACCGGAAGCTCTCAGAGTTCTGCCTTCGATGGTGTAAGAGGGAAAGAATACCAAGAACCATGGGACTATTACAGTTCTTATCCAGTTACTCTTCCTTTAAGGAGGCCGTATTCAGGAAACCCAGAACTTCTTGATGAGGAGGAATTTGGGGAGGATGCAGAATCCTCAACTTATAATGAAAATACATCAAATCCAGCAACGGATCTTGGACTATTGGAGGTGAATCCAGAGGCAAGTTTGTTTTTGCTTAAGTTACCATCAACTTTGCCTATGATCAAACAATCAGCTACTGCCGGAGTCCAGGATGTACCTTCAAGCTCCAAACGGCCTGTCGGGGCCCAACCGGTGGAAAGGGCGTGTAATCTGGGCGATTTACCATCAGGATTGTTAGGTAAACTGCTCGTATACAAGAGTGGTGCAGTAAAGCTGAAGCTTGGTGATACTCTGTATGATGTTTCCTCTGGTATGGAGTGTGTGTGTGCCCAAGATGTTGTTGCGGTCAATACTGCTGAGAAGCATTGTTGCGCTGTCGGAGAGATCAGCAAGCATGTTACTATAACTCCAGACGTGGATGCCATATTAAAGAGTGTGGCTGATTTATGA 1074 0.4562 MNKAHLLRTQKVGSAKFQTCRLRAPLLLPRLVGFLSVAVNSSRTLKVRLKQKYPPSCANRIKNILMDSDAPKPAAPRKVKFAPKAPPRRVPKAEVKAEVVHDEDAVQARDLLRRFNESSMRTKPKVEKKVSASQIAFGVGGSSASIKTYGTSWGASGTGSSQSSAFDGVRGKEYQEPWDYYSSYPVTLPLRRPYSGNPELLDEEEFGEDAESSTYNENTSNPATDLGLLEVNPEASLFLLKLPSTLPMIKQSATAGVQDVPSSSKRPVGAQPVERACNLGDLPSGLLGKLLVYKSGAVKLKLGDTLYDVSSGMECVCAQDVVAVNTAEKHCCAVGEISKHVTITPDVDAILKSVADL 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0822 357 PANTHER DNA-DIRECTED RNA POLYMERASE III 66 355 IPR007811 GO:0003677|GO:0005666|GO:0006383
Lele22g0822 357 MobiDBLite consensus disorder prediction 68 92 - -
Lele22g0822 357 Pfam RNA polymerase III RPC4 250 347 IPR007811 GO:0003677|GO:0005666|GO:0006383
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0822 Lele-ChrLele22 5423255 5426255 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g0822 22 5423255 5426255 Lele22g0822 22 5423255 5426255 ECH
Lele22g0822 22 5423255 5426255 Lele23g1228 23 17730699 17739160 hybridization
Lele22g0822 22 5423255 5426255 Lele24g0793 24 5337994 5340576 hybridization