Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0821 ATGATGATGAACGGAGGAAGAAACTCCAACAGGTTTCCTTTTACTCCATCACAGTGGCAAGAGCTTGAACATCAAGCTCTTGTTTTCAAGTACATGACTTGTGGTATTCCTATACCTCCTGATCTCGTCTTCTCCATCAAAAGGGCTTCTTTAGATCACTCTCCTCTTTCTTCAAGGCTCTTGTCTCTCCCACCTCATCACAACTTTGGGTGGAACTACTTGGAGATGGGGTTGGGAAGGAAGATAGATACAGAACCAGGGAGGTGTAGGAGAACAGATGGGAAGAAATGGAGGTGTTCTAAAGAAGCTTACCCAAATTCAAAGTACTGTGAGAGACACATGCACAGAGGAAATAACCGTTTGAGAAAGCCTCTGCAGCAACAGCAAGTTTTCAAAACAACGTTAACCCCACCTACCAACAACAACAACAGAGATTCCTTAACAGTCACAAGAAGTAACAGCACTGCTCCTCCTTCACTCTCCCTCACTACTACCACTCATTCATCATCTTCATCCCACCACAATCATCATTCCTTCCTCTATAATAATCACCAACCTTCATCAAGATCTTCTTCATCTGGTTTCAGCTTCTCTTTACAAGATGATACTGCTTCTCACTTTAGGAGTAGTGCTTATGTTTATGATGGGCTGAAAGAAGAGGTGGACGAGCATGCTTTCTTCACAGAGCCTTCTGGGACGATGAGAAGCTTATTTGATTCATCAATGGAAGATTCTTCGTGGCAACTTACGCCACTGTCAATGAACTCATCGTCTTCTTCTTCCTGGAAACAGAGGAGCTACTCTGGTTTGTCCACCGACTACTCTTCTTACTTGCAGCTTCAAAACCAGACGAACCAGCAAGATCAAGATTGCTACAACATGCTGGCACTGGGAAAATCAGAAGAACCTCAGAATCACACAAGACTGTTCATCGCTTCTTCGATGAATGGCCCAACAAAAGCAAAAACTCGTCGTGGCTTGATCTGGACGATAAATCATCCACTACCCAGCTTTCAATTTCCATTCCCACCACCACCTCTGATCATCATGACCATTTTCCAAGCTTCAACTTCAGAACCCACCAAGCAATTTGCAGAGGGCAACTGTGGAAGTGCTAGTTTGATACTTTCTTCGAGCCGGAGGATGCCTATCAAATGGGTTTTGCACTGGCAGCCCAACGCAGGAACTATGGTGAATAGCCAAATTCTTAATGAAGTTTCTCAGTGCGTTGAGAGCATCAATGGCGTCAAAGACGGAAGATGGAAAGCAACTCTAACATTCTATCGACCCAATTTACGAGACCAGTCGCTACAGGCCGAATTTCCGCGTGATTTTCTGGGGATATCGCTTCTTGAGCAACCTCACAAATACTACTTCATAATTCGCGGCCAGAGGATCGTTCTGGAAGCAGATTCTTCAATTCTGACTATAATGGAGAAGCTGCAATCTTACAAGTCCAAGGTGGCACTCAATTTTGAGGGAGTTTTGTATAAATTGGGTGACTTTCAGCTGAAAGTTGGAAAAGTTGCCCCCAATTCTTCTGAAAGCCTGAGAGGAATTGTGATGGAGGTTGAGTATCTCCCCATTTCTTCCATAGAGAAATCCAGGCAAGTTATGGAAGAATTCCTTAATATATGGCGAGAAGCAGTGTCAAAAAAATCATTACCTGGTCAATTCATGCATGTGGAACCAAATTATGCAGAATATGGTCTGTTGGATAATTATACTTCGCAACATACAGCTGTTCAGTATGCTACTGCGTTGGCCCAACTGATTGCTACAGTACAACAACAACCCGCGCAATCCATGAGGAGTTAG 1818 0.4373 MMMNGGRNSNRFPFTPSQWQELEHQALVFKYMTCGIPIPPDLVFSIKRASLDHSPLSSRLLSLPPHHNFGWNYLEMGLGRKIDTEPGRCRRTDGKKWRCSKEAYPNSKYCERHMHRGNNRLRKPLQQQQVFKTTLTPPTNNNNRDSLTVTRSNSTAPPSLSLTTTTHSSSSSHHNHHSFLYNNHQPSSRSSSSGFSFSLQDDTASHFRSSAYVYDGLKEEVDEHAFFTEPSGTMRSLFDSSMEDSSWQLTPLSMNSSSSSSWKQRSYSGLSTDYSSYLQLQNQTNQQDQDCYNMLALGKSEEPQNHTRLFIASSMNGPTKAKTRRGLIWTINHPLPSFQFPFPPPPLIIMTIFQASTSEPTKQFAEGNCGSASLILSSSRRMPIKWVLHWQPNAGTMVNSQILNEVSQCVESINGVKDGRWKATLTFYRPNLRDQSLQAEFPRDFLGISLLEQPHKYYFIIRGQRIVLEADSSILTIMEKLQSYKSKVALNFEGVLYKLGDFQLKVGKVAPNSSESLRGIVMEVEYLPISSIEKSRQVMEEFLNIWREAVSKKSLPGQFMHVEPNYAEYGLLDNYTSQHTAVQYATALAQLIATVQQQPAQSMRS 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0821 605 SMART QLQ_2 12 48 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele22g0821 605 Pfam WRC 85 124 IPR014977 -
Lele22g0821 605 ProSiteProfiles QLQ domain profile. 13 48 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele22g0821 605 Pfam TATA-binding related factor (TRF) of subunit 20 of Mediator complex 382 588 IPR013921 GO:0003712|GO:0006357|GO:0016592
Lele22g0821 605 ProSiteProfiles WRC domain profile. 83 127 IPR014977 -
Lele22g0821 605 MobiDBLite consensus disorder prediction 131 185 - -
Lele22g0821 605 Pfam QLQ 13 46 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele22g0821 605 PANTHER UBIQUITIN SPECIFIC PROTEASE HOMOLOG 49 387 596 IPR013921 GO:0003712|GO:0006357|GO:0016592
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0821 Lele-ChrLele22 5417417 5422268 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0821 6 143 GRF Transcription Factor Family AT3G13960 65.493 1.92e-52 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Lele22g0821 Med20 1.4e-41 CL0273