Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0788 ATGTCTGTTTTCATAGGTTGCCACCATGGAGAAATTGAGCTTGGATTCTCATCTGTCTCTCTTGGTGCCGAGATTCAAACCGATGTGCAGAACTGGTTTCCCGAAGAATTTTCTAGAGTACAATCCCATCAAGTTGATCAGAAGATTCCACCTTTGAGATCACTGTCTACAGGAAGCTCCGATCAGGACACTTCCCTCCTATTCGGCAATATTCCGAGCAGTTCTCTCTTGCCTGAAATGCTTCTGATGCAGCAAGCGAATGAACACGATGACGGCAAGGTTAAAGCAATTCTTCATGCTATATCTTCGCCTTCTTCAGAAAGAGTTAGTGCTTTCAAGAGGTACAGAGCTTATGAAATGGGTCACTATAAACCCAATTTGCGAAGGAAAAGCTTGCTCAAGAGATCTTTGGAAATGCTTAGAGGCTTACATTTCATGAGAACGAGAGAGCATTATGAAGCCTCTCATCACACCAGTAGCCAGTTCCTTCACATGTTGTCGGAACGAAGAAGGCGTGAGAAACTCAATCGGAATTTTCAGGCACTTAGATCACTCCTCCCTCCAGAAACCAAGAAAGACAAGGCATCAATACTTATAGCAGCAACGGAGACATTGAGCTCGTTGATGGCTAAGATTGAAAAGATGGCCAAAAGAGATGAGGAGCAACAAGTGAAGGAAAAAATGAAAGGGAAGGAACAAATAACAGGACAAGAAGCCAAAACCAGCTGTTGTTCAACTGATGAAAGATTGATCAGTGTGAGGGTTTCAGATGTTGCTGCAGGATCATGGAGCTCATCAGAGGGAAGATTCACCGACCTACACGTGACTGGGAGTGATTGGGATGAGGCTGCCTTTGAAGAAGCTGTGAGAAGAGTGGTTGCTGACCTGGCAAGGGGACCAATCACCACCTGA 912 0.4485 MSVFIGCHHGEIELGFSSVSLGAEIQTDVQNWFPEEFSRVQSHQVDQKIPPLRSLSTGSSDQDTSLLFGNIPSSSLLPEMLLMQQANEHDDGKVKAILHAISSPSSERVSAFKRYRAYEMGHYKPNLRRKSLLKRSLEMLRGLHFMRTREHYEASHHTSSQFLHMLSERRRREKLNRNFQALRSLLPPETKKDKASILIAATETLSSLMAKIEKMAKRDEEQQVKEKMKGKEQITGQEAKTSCCSTDERLISVRVSDVAAGSWSSSEGRFTDLHVTGSDWDEAAFEEAVRRVVADLARGPITT 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0788 303 SMART finulus 165 214 IPR011598 GO:0046983
Lele22g0788 303 CDD bHLH_AtbHLH_like 164 215 IPR045239 -
Lele22g0788 303 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 159 208 IPR011598 GO:0046983
Lele22g0788 303 Pfam Helix-loop-helix DNA-binding domain 164 208 IPR011598 GO:0046983
Lele22g0788 303 PANTHER TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED 31 295 IPR044658 -
Lele22g0788 303 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 158 221 IPR036638 GO:0046983
Lele22g0788 303 Gene3D - 157 235 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0788 Lele-ChrLele22 5195300 5201283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0788 3 297 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G56960 31.266 4.15e-37 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele22g0788 HLH 1.5e-10 No_clan