LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele22g0781	ATGGGGCTGTTTCCGTTGCCCATTCTTTTTCTGGTGAAGCTCTGCGCCATTAGCTTTGCTTTGGGAGTCCAAGGATCTAGAGTTTCTTCTGTTGTTTTATGCTTTTCTATTAATCTTCTCCTAGATTTTGCTGTTTCCCCATCCCCAGCAACCATTCCAGTGCATTCTTCTCCCACAAACTCTTGGGGAACAATTGCCCCAAATACACCAGCTGTACCAAATGGGCCTTTGTTACACCATTCAGTTGCATCTTCACCTCCCACAACTCCATTGCCAATGAAGACAATGGGGGCCGCCGAGCCATCTGCATCACCAAGTACTAGTGCTGCAACGATATCACCATCATTTAAGGTTGTTCCTCCACCCTCAGCTGAGCCATCTGCATCACCTAGTTCAAGTTCTACAATGTTACCACCAACATCATCTAAGGCTGTCCCCCCACCTTCTACTGAGCCATCTGCATCACCAAGTGCAGGCGCTACAATATCACCGCCTCCATCATACAAGGTTGTTCTTCCACCCTCATCTCAGCCATCTGCACCACCAAGTGCAACAGTATTACCGCGTTCATCACATAAGGTTGTTCCTCCACCCTCAACTTCACAACGGCAAGTACCACCTTCAGTACAACCGAGTCCTCCTCAAAGAACAGAACCTGCTTTGACACCTCCAGTCTCCACGCCTGACATTCCAGCTCCCATTGCAACGCCTTCTGTTGATATGCCTAAACATTCGCCAGTTAGGTTGCCAGTTGAACCGGATTTACCACCTAAAAGAAATGCAAATGAGAGTCACAACGTGGAGCCAGTTTCACCAGGCATGGATGCAAAGAAAGGTCATGCCCCGGAGCCAGCTTTACCGACCCCAGCAGTACCTTCTACCAAATTGCCAAACAGTTCACCAATCAGTCAACCAACTGGACATGGAAGTTTGCCTCCTAATATCCATAGTAGGAATGCAACCTCTCCTGCGCCTCCTGCCAGTTTGCCTCAAATTTCACCAGTTAGCCAACCAAGTACACATGGAAGTTTGCCACCTAAAGTTCATAAAAGGATTCCAAATGAGGATCACACCCCAGAGCCAGCTTCGCCAGAATCTGTTGCATCCTCCCCAAGAAACATGCGACATAACCCACCACTAGTTCACCCTATTTCCCCAAGTTTAACTCCGCCAATATTACCGGCACCAGTTGCATCACCATCAAGTGCATTCCCCATTAACCCACCATCTGTCCACCCAGTTATACCTGTATTATCTCCAACAGAAATACCAGCTGCAGCAATCTCTCCTTTATCAACTCCTTCCAGAGTTATCAATTGGAAAAAGGGTGGAGCACCAGTTGCTGCGCCTTCATATAAACCATCAAAGCCGCTTCCAGCTTCAATACATTCCCCTCCTCAAGCCCCTGCTGCACATGAGCATCATCATAAAAGGAACATATTCCCCAGTCCTGCTCCTGCATCATCAGATCTAGTTTCCCCTTCTACTTCAATTAACCAAGCAACGCCTCCTTCATTACTCCCAACAAGCGCACGAAGACATCATGGTCCACCACCAGCTAACCCAGACTGTTTATCAACTGTCTGCACAGAGCCCTATACAAATTCTCCCCCCGGAGCACCCTGCAGATGTGTCTGGCCCATGCAAGTTGGTCTTCGACTCGGGGTTTCTCTTTATACCTTCTTCCCTTTGGTTTCAGAACTGGCTTCTGAAATTTCCATAGGAGTTTTCATGAAGCAAAGTCAAGTTCGCATAATGGGAGCTAAATCAGCTGATCAGCAACCAGAGGAAACTGATGTTTTAATTTATTTGGTTCCACTTGGGGAGATTTTTGATAACACTACAGCTGTTTTGACCTCTCAGAGATTTTGGCATAAAAAGGTTGCTATAAAAGCTTCTTACTTTGGAGACTATGAAGTGTTATATGTGAGCTATCCAGGCTTACCGCCATCGCCTCCTCTACCGCCGAGCATCACAATGATAGATGGTGGTCCATATTCTAATGGCAATAATGGAAGGACAATAAAGCCCATTGGGGTGGACATACCAAAAAGACAGCATAGGAATCGACTTAGCGGCAGCATGATTGCCATTATTTCACTTTCAGCTTTTGTAGCCGTTCTTTTATGTTCTGCTGCTGCATGGGTCTTGTTGTTCAAGCGCAGAGATCATGTATCTCAAACAACATCGAATCCTCGGACTTTACCTCCTTCTCTTTCTAAAACCCCAGGCACTGTTGGGTCATTGACTGGAGTTGGGCCAGTTTCTGCATCTTCATCATTTCGATCTAGCATTGCAGCTTATAAAGGTTCTGCCAAGACTTTCAGCATGAGTGACATTGAGAGAGCCACTAATAAGTTTCACGATTCAAGAATACTTGGAGAAGGTGGTTTTGGGCGCGTTTATAGTGGTACTCTTGATGACGGGACTAAAGTGGCAGTCAAGGTTCTAAAGAGGGAGGATCATCATGGTGATCGCGAATTCCTAGCTGAAGTTGAGATGCTTAGCCGTTTGCACCATCGAAATTTGGTCAAGTTGATAGGAATATGCACAGAGGAGACATTCCGCTGCTTGGTTTATGAACTCATTCCAAATGGCAGTGTGGATTCCCATTTGCATGGTTGCTATGGTGTTGTTCTTCTTGAGCTTCTGACTGGAAGAAAGCCAGTAGATATGTCACAACCTCCCGGTCAAGAGAACCTCGTCGCGTGGGCGCGCCCCCTGCTGACAAGCAGAGAAGGACTTGAAGCGATAATTGATCCCTCACTGGGACCCGATGTGCCTTTTGATAGTGTGGCTAAAGTTGCAGCCATTGCTTCAATGTGTGTGCAGCCAGAGGTATCGAACCGTCCTTTCATGGGAGAGGTTGTCCAGGCCTTAAAACTCGTATGTAACGAATGCGACGAAGCGAAAGTAGCAATTTCAAGAAGTTCTAGCGAGGATGATTTGTCTGTTGACTTGGATATGGGAATCAGTACTGTTTCTAGACCACAACGACCAGATAACATCCAAGGACAACACTTTGCTACCAACATGGACCGGGGAATGGATATCGAACGAGGGTTATCGGCATCAGAATTATTCAGTTCATCTGCAAGATTTGGTAGAGATGAATCTGGATCATTTAGAAGACACTCTTATTCAGGTCCTTTGAGGACTGGAAGAAGCAGACGGTTATGGCATATGTTTAGAAGGATTTCTGGTGGTAGTGTCAGCGAACATGGAATCATGTAG	3234	0.4638	MGLFPLPILFLVKLCAISFALGVQGSRVSSVVLCFSINLLLDFAVSPSPATIPVHSSPTNSWGTIAPNTPAVPNGPLLHHSVASSPPTTPLPMKTMGAAEPSASPSTSAATISPSFKVVPPPSAEPSASPSSSSTMLPPTSSKAVPPPSTEPSASPSAGATISPPPSYKVVLPPSSQPSAPPSATVLPRSSHKVVPPPSTSQRQVPPSVQPSPPQRTEPALTPPVSTPDIPAPIATPSVDMPKHSPVRLPVEPDLPPKRNANESHNVEPVSPGMDAKKGHAPEPALPTPAVPSTKLPNSSPISQPTGHGSLPPNIHSRNATSPAPPASLPQISPVSQPSTHGSLPPKVHKRIPNEDHTPEPASPESVASSPRNMRHNPPLVHPISPSLTPPILPAPVASPSSAFPINPPSVHPVIPVLSPTEIPAAAISPLSTPSRVINWKKGGAPVAAPSYKPSKPLPASIHSPPQAPAAHEHHHKRNIFPSPAPASSDLVSPSTSINQATPPSLLPTSARRHHGPPPANPDCLSTVCTEPYTNSPPGAPCRCVWPMQVGLRLGVSLYTFFPLVSELASEISIGVFMKQSQVRIMGAKSADQQPEETDVLIYLVPLGEIFDNTTAVLTSQRFWHKKVAIKASYFGDYEVLYVSYPGLPPSPPLPPSITMIDGGPYSNGNNGRTIKPIGVDIPKRQHRNRLSGSMIAIISLSAFVAVLLCSAAAWVLLFKRRDHVSQTTSNPRTLPPSLSKTPGTVGSLTGVGPVSASSSFRSSIAAYKGSAKTFSMSDIERATNKFHDSRILGEGGFGRVYSGTLDDGTKVAVKVLKREDHHGDREFLAEVEMLSRLHHRNLVKLIGICTEETFRCLVYELIPNGSVDSHLHGCYGVVLLELLTGRKPVDMSQPPGQENLVAWARPLLTSREGLEAIIDPSLGPDVPFDSVAKVAAIASMCVQPEVSNRPFMGEVVQALKLVCNECDEAKVAISRSSSEDDLSVDLDMGISTVSRPQRPDNIQGQHFATNMDRGMDIERGLSASELFSSSARFGRDESGSFRRHSYSGPLRTGRSRRLWHMFRRISGGSVSEHGIM	1077

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele22g0781	1077	Gene3D	Transferase(Phosphotransferase) domain 1	875	983	-	-
	Lele22g0781	1077	MobiDBLite	consensus disorder prediction	200	231	-	-
	Lele22g0781	1077	ProSitePatterns	Protein kinases ATP-binding region signature.	793	815	IPR017441	GO:0005524
	Lele22g0781	1077	MobiDBLite	consensus disorder prediction	100	114	-	-
	Lele22g0781	1077	MobiDBLite	consensus disorder prediction	450	520	-	-
	Lele22g0781	1077	MobiDBLite	consensus disorder prediction	727	747	-	-
	Lele22g0781	1077	PANTHER	OS01G0750732 PROTEIN	517	872	-	-
	Lele22g0781	1077	SUPERFAMILY	Protein kinase-like (PK-like)	760	960	IPR011009	-
	Lele22g0781	1077	MobiDBLite	consensus disorder prediction	77	386	-	-
	Lele22g0781	1077	FunFam	receptor-like serine/threonine-protein kinase ALE2	760	862	-	-
	Lele22g0781	1077	MobiDBLite	consensus disorder prediction	292	326	-	-
	Lele22g0781	1077	MobiDBLite	consensus disorder prediction	486	507	-	-
	Lele22g0781	1077	MobiDBLite	consensus disorder prediction	167	181	-	-
	Lele22g0781	1077	ProSiteProfiles	Protein kinase domain profile.	787	1077	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele22g0781	1077	Gene3D	Phosphorylase Kinase; domain 1	759	862	-	-
	Lele22g0781	1077	Pfam	Protein tyrosine and serine/threonine kinase	790	873	IPR001245	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele22g0781	Lele-ChrLele22	5104423	5115545	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele22g0781	521	874	Receptor kinase-like Gene Family	AT5G56890	63.025	2.61e-139	446

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_Extensin	Lele22g0781		PK_Tyr_Ser-Thr	2.2e-17	CL0016