Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0758 ATGGGTGGGTGTTTTCCTTGTTTTGACGAGGAGGACAGCGGGGTGAAGAAGGAAGTGGTCAAGAAAGATTCTGTTAAAGAAGGTTCAGCTGCTCAGTCTCATCATGTCAATAGGGTTAGCTCAGATAAGTCAAAATCAAAAAATGGCTCTGATTCTAAGAAGGAACTACCAGTTCAAAAGGATGGAACAACTGCCCACATTGCTGCACAAACTTTTACCTTTCGAGAGCTTGCAGCTGCCACAAGGAATTTCTGGCCTGAATGTTTATTAGGTGAAGGTGGTTTTGGACGTGTTTATAAAGGCCGCCTTGAAAGCACCGGGCATGTTGTTGCTGTAAAACAGCTTGACCGCAATGGCCTTCAAGGAAATCGAGAGTTTTTGGTGGAGGTGCTCATGCTTAGCCTCTTGCATCACTCAAATCTTGTGAGCTTGATCGGTTATTGTGCTGATGGAGATCAGCGGCTGCTTGTCTATGAGTTTATGCCTTTGGGGTCTTTGGAGGATCACCTACATGATCTTCCTCCTGACAAGGAGCCTTTGGACTGGAATACAAGGATGAAAATAGCAGCTGGAGCGGCAAAGGGATTGGAATATTTACATGACAAAGCAAACCCTCCTGTAATATATAGAGACCTAAAATCATCCAATATCCTGCTAGACGAGGGTTTTCATCCAAAATTATCAGATTTTGGGCTAGCGAAACTCGGTCCAGTTGGTGATAAGACGCATGTATCAACACGAGTAATGGGAACTTATGGTTATTGTGCCCCAGAATATGCTATGACTGGACAGCTAACTCTTAAGTCTGACGTCTACAGTTTTGGAGTTGTTTTCCTGGAACTTATTACCGGGCGCAAGGCTATTGATAATACACGTGCACATGGCGAGCATAATCTTGTGGCATGGGCACGACCTCTGTTTAAAGACCGTAGGAAGTTCCCCACAATGGCTGATCCTCTGCTTCAAGGCCGTTATCCAATGCGAGGACTCTATCAAGCACTTGCAGTGGCAGCTATGTGTTTGCAAGAACAAGCTGCTACAAGGCCTCTTATTGGAGACGTTGTGACCGCTCTTACATACTTGGCCTCACAGACGTATGATCCAAATGGATGTGGTCATACTAGCCGAGTTGGTCCATCAACCCCGAGGAGCAAGGAGGATCGAAAGAACATGGCAGATAGCTCGGATAGCCCTGATCACGGACGATATCGTGGATCACCTTCCACCCATAGAAACTCACCCGATTACAGGAAGAGAGATGGTAGGGATCCAAGTTCTGGGACAGGCTTGGGAAGGATTGAAACTGGTGGAGGTTCAGGAAGAAGATGGGGATTGGATGATGGAGAAAGGCAGGACTCTCAGAGAGACAGCCCTGTAGGTGCTGGGGGAAGAGCTAGGGAAACTCGGAGGAACCGTGACCTCGACAGGGAATGTGCAGTTGCAGAAGCAAAAGTATGGGGAGAAAATTGGAGAGAGAAAAAGCAGACAAATGCAATGGGAAGCTTCGATGCTACAAATGAGTGA 1524 0.4672 MGGCFPCFDEEDSGVKKEVVKKDSVKEGSAAQSHHVNRVSSDKSKSKNGSDSKKELPVQKDGTTAHIAAQTFTFRELAAATRNFWPECLLGEGGFGRVYKGRLESTGHVVAVKQLDRNGLQGNREFLVEVLMLSLLHHSNLVSLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKSSNILLDEGFHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVFLELITGRKAIDNTRAHGEHNLVAWARPLFKDRRKFPTMADPLLQGRYPMRGLYQALAVAAMCLQEQAATRPLIGDVVTALTYLASQTYDPNGCGHTSRVGPSTPRSKEDRKNMADSSDSPDHGRYRGSPSTHRNSPDYRKRDGRDPSSGTGLGRIETGGGSGRRWGLDDGERQDSQRDSPVGAGGRARETRRNRDLDRECAVAEAKVWGENWREKKQTNAMGSFDATNE 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0758 507 MobiDBLite consensus disorder prediction 368 476 - -
Lele22g0758 507 MobiDBLite consensus disorder prediction 462 476 - -
Lele22g0758 507 Gene3D Phosphorylase Kinase; domain 1 54 160 - -
Lele22g0758 507 PANTHER OS07G0668900 PROTEIN 4 369 - -
Lele22g0758 507 SMART serkin_6 84 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g0758 507 FunFam Serine/threonine-protein kinase PBS1 161 376 - -
Lele22g0758 507 CDD STKc_IRAK 90 359 - -
Lele22g0758 507 MobiDBLite consensus disorder prediction 488 507 - -
Lele22g0758 507 MobiDBLite consensus disorder prediction 19 60 - -
Lele22g0758 507 ProSitePatterns Protein kinases ATP-binding region signature. 90 113 IPR017441 GO:0005524
Lele22g0758 507 ProSiteProfiles Protein kinase domain profile. 84 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g0758 507 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Lele22g0758 507 Pfam Protein kinase domain 89 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g0758 507 Gene3D Transferase(Phosphotransferase) domain 1 161 370 - -
Lele22g0758 507 SUPERFAMILY Protein kinase-like (PK-like) 66 358 IPR011009 -
Lele22g0758 507 Coils Coil 464 484 - -
Lele22g0758 507 MobiDBLite consensus disorder prediction 38 60 - -
Lele22g0758 507 FunFam Serine/threonine-protein kinase PBS1 57 160 - -
Lele22g0758 507 MobiDBLite consensus disorder prediction 380 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0758 Lele-ChrLele22 4962344 4968369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0758 4 363 Glycoside Hydrolase AT3G07070 65.193 8.04e-169 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lele22g0758 Pkinase 1.1e-44 CL0016