Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0753 ATGGAATCGAATCGCCGGCGAACGACGCGGCGGAGGAGGGAGCAGAAGGAGCTGGTAAGGAAAGTAATCTGGCCTTCAATTCGGGGGCATTCTTGTCCGATATGTTTCAGAAACCTCGAAGATCATTATAAGGAAGCTGCCATTCTCTCCGTGTGTATGCATGCCTACTGTATCGAATGTATTCGCAAATGGAGTGGCTTGAAAAGAAAGTGTCCTCTGTGTAATGCAAACTTCAGCTCTTGGATCTGCAAACTCAGTCTTTCCTCTAGAGAGTTCCAGAAAGAGGCGTTGCCCTTTGAAGGTTCGACCAGAAATTCTCATCAAGAAATTAGCTCAAGCCATCTAGATGCTCGTAGGAAAACAAGCTATCTTGAGCAGATTGAGCCATGGATACGGAGGGAGCTACAAGCCGTGCTTGGTGACCCAGATCCAACTGTCATAGTTCATATGGCAACCTCACAGTACTTTGCATGGCTGGAAGAGAAAGTTAGGTCTGGACAGTTTGATGCTGAAGAGAGGTTTATATCAGCCCTGCGTCCTTTCCTGCAAGATAAAGCTAGGATCTTTTGGCATGAGCTAAGCTTCCGAATTGGCTCTGTCTACCAATTCATTGGTGAGCTCCTCATCCAACCTGATAACAAGGTATGCTCTTGTCAAGATCTGGTTGAATTTCTGCTTCATCTTGCTCTTGCATTCACACTTGGGCACATGGGAGTCTTGCAGGCACGTGTTGGCAGAAATGTTTATGGAATTGATCCCAATCTCTATCATCAATCCATACTGCTCGTAAGACAGTTTCAAGCTGATCTCCTAAAATAA 819 0.4567 MESNRRRTTRRRREQKELVRKVIWPSIRGHSCPICFRNLEDHYKEAAILSVCMHAYCIECIRKWSGLKRKCPLCNANFSSWICKLSLSSREFQKEALPFEGSTRNSHQEISSSHLDARRKTSYLEQIEPWIRRELQAVLGDPDPTVIVHMATSQYFAWLEEKVRSGQFDAEERFISALRPFLQDKARIFWHELSFRIGSVYQFIGELLIQPDNKVCSCQDLVEFLLHLALAFTLGHMGVLQARVGRNVYGIDPNLYHQSILLVRQFQADLLK 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0753 272 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 28 140 IPR013083 -
Lele22g0753 272 Pfam Telomere-capping, CST complex subunit 192 268 IPR029146 GO:0003697|GO:1990879
Lele22g0753 272 SMART ring_2 32 74 IPR001841 -
Lele22g0753 272 ProSitePatterns Zinc finger RING-type signature. 52 61 IPR017907 -
Lele22g0753 272 SUPERFAMILY RING/U-box 27 81 - -
Lele22g0753 272 PANTHER E3 UBIQUITIN-PROTEIN LIGASE TOPORS 9 95 - -
Lele22g0753 272 Pfam Ring finger domain 31 75 IPR001841 -
Lele22g0753 272 ProSiteProfiles Zinc finger RING-type profile. 32 75 IPR001841 -
Lele22g0753 272 Gene3D - 187 270 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0753 Lele-ChrLele22 4927752 4933766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0753 21 99 C3H Transcription Factor Family AT2G39100 49.367 4.63e-24 96.3