Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0738 ATGTTTAATTCCCAACGCCTCAAAGCCGTTTTATGCTTGAAGGGTATTCTCAGAGAATCGCCAACCCCGCAATGCTTTCGTCTTTTGCAACCCTACCCATCACCGGCATCATCTCTCAAATTCAGCACAAGGGCTTCTCCAGGTAATCACTCGTTTACTGTATCATACCTCATTAACAGTCTAGGGTTCTCCCAAGATGACGCCTTAAATGCTTCCAAGAGCGTTCAATTCCAGACCTCAAAAAAGCCAGATTCAGTTGTCAGCTTCTTCAGAAGCCACGGGTTCTCTGAATCTCTCATACGCGATATCATTAGAAAGGATTTGTTGCTTCTTCTTTGCGATCCCCGCAAAAGGATTTTGCCCAAGTTTGAATTTCTCCTCTCAAAAGGTGCTTCTACATCCGACATTGCCCTTATGGTGCAAAGGAGTTCGAGATTCCTGGAGCGAAGCTTGGCGAAGCACATAATCCCATTATATGAATTACTGATAGGGTTTTTGCATAGTGATGAAGCAACCATCGATTGTATAAAAGCCTATCCGGATACGCTTTATGACACTCGAGTGATAGATAGTATCAAGATGCTGCATAAGAATGGAGTGTCAAGAACCAACATTGCTATCATACTCAAAAGGAGGTCTCGTGTACTGATGCACGGCCTAGATGATCTTATGAAGGTCGTAGAGGAAATTAAGTGTTTGGGGTTTGATCCTTCGAATACAACATTTAGTATTGCATTGTTAGCCAAAATGTGTTTGAGCAAGTCCCGCTGGGAAGCCAAAGTTGATGTCTACAAGAGATGGGGATGGTCAGAAGAATCATGGTCGGAAGCATTTAGGAAGCAACCGCACATTATGTTAACATCCGAGGATAAAATTGATGCAATTATGAGTTTTTGGAGTAACCATTTGGGTTTGAGTCCTTTGGTTCTTGTCAAAGGACCAAATGTATTTGGACTTAGCTTGAAGAAAAGGATTATCCCAAGGGCTGCAGTTTTAGATTATCTTCAGTCAAAAGGGTTGATAAAAAAGAACGCTAGCTTAGTTGCGCCATTTGCGATTTCTGAAAAGCAGTTCCTGGAAAGATTTGTGAAACGTTATGAGGAGCATAATCATCATCTATCAAAGCTATATGAAGAAAATTTGAAGAATGATGGAATTTCGTGCATGAAATTTTGA 1176 0.4124 MFNSQRLKAVLCLKGILRESPTPQCFRLLQPYPSPASSLKFSTRASPGNHSFTVSYLINSLGFSQDDALNASKSVQFQTSKKPDSVVSFFRSHGFSESLIRDIIRKDLLLLLCDPRKRILPKFEFLLSKGASTSDIALMVQRSSRFLERSLAKHIIPLYELLIGFLHSDEATIDCIKAYPDTLYDTRVIDSIKMLHKNGVSRTNIAIILKRRSRVLMHGLDDLMKVVEEIKCLGFDPSNTTFSIALLAKMCLSKSRWEAKVDVYKRWGWSEESWSEAFRKQPHIMLTSEDKIDAIMSFWSNHLGLSPLVLVKGPNVFGLSLKKRIIPRAAVLDYLQSKGLIKKNASLVAPFAISEKQFLERFVKRYEEHNHHLSKLYEENLKNDGISCMKF 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0738 391 FunFam Mitochondrial transcription termination factor-like 151 370 - -
Lele22g0738 391 SMART mt_12 275 306 IPR003690 GO:0003690|GO:0006355
Lele22g0738 391 SMART mt_12 101 132 IPR003690 GO:0003690|GO:0006355
Lele22g0738 391 SMART mt_12 307 341 IPR003690 GO:0003690|GO:0006355
Lele22g0738 391 SMART mt_12 206 236 IPR003690 GO:0003690|GO:0006355
Lele22g0738 391 SMART mt_12 137 168 IPR003690 GO:0003690|GO:0006355
Lele22g0738 391 Pfam mTERF 87 305 IPR003690 GO:0003690|GO:0006355
Lele22g0738 391 Pfam mTERF 250 359 IPR003690 GO:0003690|GO:0006355
Lele22g0738 391 PANTHER CGI-12 PROTEIN-RELATED 50 366 IPR003690 GO:0003690|GO:0006355
Lele22g0738 391 Gene3D Transcription termination factor 3, mitochondrial 153 375 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0738 Lele-ChrLele22 4833533 4834708 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele22g0738 mTERF 9.5e-19 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g0738 22 4833533 4834708 Lele23g1289 23 18162502 18164501 hybridization
Lele22g0738 22 4833533 4834708 Lele24g0729 24 4867258 4871921 hybridization