Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0727 ATGGCTTGTTCTGAAGGAGAACTTGAAATAAGTTTTGGCTATCAATGCAATATTAACAGAGTTTCCTCTTCTAATTTAATCGATAACTATAAAATCCTGCCTGTACTCCGTAAAACAAGCAGTTTCTCTTGCTTGTCTGGTGCCGCCTTAAGTGCCAATGCTACATTAGCCAACACTAACATCTGCGATGGTGTGATAGGAAGAGAAATTCTTCGAAGCTGGGACTCCCCTAATATGTTTCGTAAGGTAGCCTCTTCTTCAAGCATTTCAAGGTTGGATATGTTGTCATCTTCTCTCCAAAGCACTTTGTCAAATTTAAGTAGCAGTCCATCCACCCCGAGTAATATGCTTGAACATGACTCTTGCATAATAAAATCCTCGATCGCTCCCTCCAGAAGTGAAGGTTTTCTTAATGCTATGGAATTACAAGTAGCAGGAGGAGCTGCTGGTGAAGATAGAGTTCAAGCAGTTTGTTCTGAAGAAAATGGGTGGCTTTTTTGTGCTATTTATGATGGCTTTAATGGGAGAGATGCAGCTGACTTTCTGGCCGGTACTCTGTTTGACACCATTTCATCTTATTTTAGAAAGTTATATTCTGAATTGGAGACAGATTCTTTCAGTACTTATAACAATATGGGTTTGGATGGATCAGTCGAACATAAGTTGGATGATAGCCTTCATAATTGTGACAAACAATCATTTTCAGATGGGGTACTTGATTGCCTGCAGCGTGCTCTTAGTCAGGTTGAGAATGATTTCTTACACATGGTTGAGCAAGAAATAGAGGATCGCCCAGACTTGGTTTCAATTGGATCTTGTGTTTTACTTGTGCTTCTTCATGGGAATGAATTATATACGCTTAATCTTGGTGACAGCAGAGCAGTATTGGCAACGAGCAGTTGTGAATCAAATTGGGGTGGAAAACTTAAAGCTATCCAGCTTACAGATAGTCACACTGTTGAAAATGAAGCTGAAAGAGCTCAGCTTCTGGCTGATCATCCTGATGATCCTAGGACCATTATATCAGGAAGAGTGAAAGGAAAATTGAAGGTTACTCGCGCAGTTGGAGTTGGCTACTTGAAAAAGAAAAGTCTGAATGATGCATTGATGGGAATCCTTCGGGTTCGTGATCTTGTAAGCCCTCCATATATTTCCGCTGAACCATCATTAGGCGTACATAAGATCTCAAGTTCTGATCATTTCGTCATAGTGGGGAGTGATGGTTTATTTGATTTCTTCAACAATGACGAGGCAGTGGGGCTTGTAGAGTCTTATATCCAGACCAATCCTTCTGGTGATCCAGCAAAGTTTCTTGTCGAGCAGCTTGTATTCAAAGCAGCTGATTGTGCAGGTTTCAGCATGGAAGAGTTGATGAATATACCAGCAGGAAGGAGGAGGAAGTACCATGACGATGTAACAGTTATTGTGATCATCCTTGGCACCAATCAGCGGACTTTAAAGGCATCAACTTGTGTATGA 1479 0.4097 MACSEGELEISFGYQCNINRVSSSNLIDNYKILPVLRKTSSFSCLSGAALSANATLANTNICDGVIGREILRSWDSPNMFRKVASSSSISRLDMLSSSLQSTLSNLSSSPSTPSNMLEHDSCIIKSSIAPSRSEGFLNAMELQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLFDTISSYFRKLYSELETDSFSTYNNMGLDGSVEHKLDDSLHNCDKQSFSDGVLDCLQRALSQVENDFLHMVEQEIEDRPDLVSIGSCVLLVLLHGNELYTLNLGDSRAVLATSSCESNWGGKLKAIQLTDSHTVENEAERAQLLADHPDDPRTIISGRVKGKLKVTRAVGVGYLKKKSLNDALMGILRVRDLVSPPYISAEPSLGVHKISSSDHFVIVGSDGLFDFFNNDEAVGLVESYIQTNPSGDPAKFLVEQLVFKAADCAGFSMEELMNIPAGRRRKYHDDVTVIVIILGTNQRTLKASTCV 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0727 492 PANTHER PROTEIN PHOSPHATASE 2C 130 477 IPR015655 GO:0004722|GO:0006470
Lele22g0727 492 CDD PP2Cc 149 479 IPR001932 -
Lele22g0727 492 ProSiteProfiles PPM-type phosphatase domain profile. 136 479 IPR001932 -
Lele22g0727 492 Pfam Protein phosphatase 2C 217 430 IPR001932 -
Lele22g0727 492 Gene3D - 109 487 IPR036457 -
Lele22g0727 492 SUPERFAMILY PP2C-like 150 480 IPR036457 -
Lele22g0727 492 SMART PP2C_4 130 477 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0727 Lele-ChrLele22 4774351 4776402 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0727 6 492 PP2C-type Phosphatase Gene Family AT3G16560 62.702 0.0 585
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g0727 22 4774351 4776402 Lele23g1299 23 18219396 18222847 hybridization
Lele22g0727 22 4774351 4776402 Lele24g0721 24 4811538 4813500 hybridization