Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0726 ATGCAGAACGAGGAGGGGCAAATCACTGAACTTTACATTCCAAGAAAATGCTCCGCAACAAACAGACTGATCACGGCCAAGGATCATGCTTCTGTTCAGATTAACGTTGGACATTTGGATGAGAACGGCATCTATAATGGCCATTTTTCTACTTTTGCCCTATGTGGTTTCATTCGTGCACAGGGAGATGCTGACAGTGCACTAGATCGATTGTGGCAGAAGAAGAAAGTCGAAGCCAAGCAACAGTAG 249 0.4498 MQNEEGQITELYIPRKCSATNRLITAKDHASVQINVGHLDENGIYNGHFSTFALCGFIRAQGDADSALDRLWQKKKVEAKQQ 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0726 82 Pfam Ribosomal protein S21e 1 77 IPR001931 GO:0003735|GO:0005840|GO:0006412
Lele22g0726 82 FunFam 40S ribosomal protein S21 1 81 - -
Lele22g0726 82 ProSitePatterns Ribosomal protein S21e signature. 11 19 IPR018279 GO:0003735|GO:0005840|GO:0006412
Lele22g0726 82 PIRSF RPS21e 1 82 IPR001931 GO:0003735|GO:0005840|GO:0006412
Lele22g0726 82 PANTHER 40S RIBOSOMAL PROTEIN S21 1 80 IPR001931 GO:0003735|GO:0005840|GO:0006412
Lele22g0726 82 Gene3D - 1 82 IPR038579 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0726 Lele-ChrLele22 4768492 4769498 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0726 1 81 Cytoplasmic Ribosomal Protein Gene Family AT5G27700 85.185 1.05e-52 157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g0726 22 4768492 4769498 Lele23g1300 23 18227492 18228411 hybridization
Lele22g0726 22 4768492 4769498 Lele24g0720 24 4806340 4807398 hybridization