Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0721 ATGGAGGATTCCGTAGGGCAAAAGAACAACCGTGAGTTTACTTTGGTATCAGTTGCTGAGCTCTCTTCGCCTGCTTCGTCGGCTTCGCCGGGTATTGCTCGCTTCACTTCCGACGGTCCCGTGGCGCAGTTGCAAATTCATCAAGATTCTCACCAGATTGATATCGATGTTGATCTTCGAACTGCTCAGATATTCAAATTAGGCCCTGTTCAATCAGTTTGCATGGTCGACGGGTCTGTTGTCGATGGCCAGACATTATTCTCAAGGGGAATATCTATCCAGTTTGGAAATGAGGAGGAAAGTGGGGACTTTTATGGTGTTTTCCAGCAATGGAAGAAGGAAGCGAATGCCCAAGATTCTGGTAGAAGCTTACCAAATGGAATTATACCGAGTTCTAAAAGTAAATTTGATGAGAAGATAGAGCCATCTTCTGCAAAAATGTATTTCCATTATTATGGGCAGCTTCTGCATCAGCAAAATATGTTGCAAGACTATGTTAGAACAGGAACCTATTATGCTGCAGTTATTGAGAACCGTGCCGATTTCATGGGTCGTGTAGTAGTTGATGTTGGTTCTGGTAGTGGTATTTTGTCATTATTTACTGCTCAGGCTGGTGCAAAACATGTTTATGCTGTGGAGGCATCTGAAATGGCAGAATACGCACAGAAACTCATAGCTGGAAACCCAATACTGGGTCAACGAATTACAGTGATCAAGGGCAAGGTTGAGGATGTAGAATTGCCTGAAAAAGCGGATATTTTGATATCTGAGCCCATGGGAACCTTGTTGGTAAATGAAAGGATGTTGGAGTCATATGTCATTGCTAGAGATAGGTTTCTCACTCCTGAAGGGAAAATGTTTCCCATGGTGGGAAGGATTCACATGGCACCTTTCACTGATGAATATGTGTTTATCGAAATTGCTAGTAAGGCCTTGTTTTGGCAGCAACAAAACTATTATGGTGTTGATTTGACTCCCTTGCATGACACTGCATTTCAAGGATACTTTTCTCAGCTTCAATTTGTAGAATTCTTCCTTGTTCGCTCTAGCTGCGATATAGGACTTTCTGCATTTTCTTCTGGGTCTGTTCCTGTTCCTGTGGTGGATGCTTTTGATCCAAGATTGTTAATAGCTCCTCCTATGTTCCATGTGTTAGACTTCACAAAAATAAAGGAAGAAGAGCTGTATGAAATAGATATACCTTTAAGATTCGTAGCCTCTGTGGGTGCACGAGTACATGGGCTGGCTTGTTGGTTTGATGTACTGTTTAATGGAAGTACCGTGCAAAGATGGCTTACGACTGCCCCAGGGTCACCAACAACCCACTGGTACCAGTTGCGCTGTGTTCTTTCTCAGCCAATTTATGTCATGGCGGGACAAGAAATTACTGGCAAGCTCCACATGGTTGCTCACAATGCCCAAAGCTATACGCTATATTTAACATTATCAGTTAAAGATTCTAGGGAAAACTTGAAATCTGATGGCGAGGGGGCAACTAAAATGACATCACGTAATATCCTTACATGGGAGGATCCTAGAGACAAGACTGTTGATAGGACCCTAGACATACCAATTCAATCACAAGATTTAGATGAACCTGAGATGATGCAACAACCGTCGCCTAATTCATGTGCTCAGGTTAATTCATTGATGCAGAATATTTAA 1665 0.4246 MEDSVGQKNNREFTLVSVAELSSPASSASPGIARFTSDGPVAQLQIHQDSHQIDIDVDLRTAQIFKLGPVQSVCMVDGSVVDGQTLFSRGISIQFGNEEESGDFYGVFQQWKKEANAQDSGRSLPNGIIPSSKSKFDEKIEPSSAKMYFHYYGQLLHQQNMLQDYVRTGTYYAAVIENRADFMGRVVVDVGSGSGILSLFTAQAGAKHVYAVEASEMAEYAQKLIAGNPILGQRITVIKGKVEDVELPEKADILISEPMGTLLVNERMLESYVIARDRFLTPEGKMFPMVGRIHMAPFTDEYVFIEIASKALFWQQQNYYGVDLTPLHDTAFQGYFSQLQFVEFFLVRSSCDIGLSAFSSGSVPVPVVDAFDPRLLIAPPMFHVLDFTKIKEEELYEIDIPLRFVASVGARVHGLACWFDVLFNGSTVQRWLTTAPGSPTTHWYQLRCVLSQPIYVMAGQEITGKLHMVAHNAQSYTLYLTLSVKDSRENLKSDGEGATKMTSRNILTWEDPRDKTVDRTLDIPIQSQDLDEPEMMQQPSPNSCAQVNSLMQNI 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0721 554 Gene3D Vaccinia Virus protein VP39 129 288 IPR029063 -
Lele22g0721 554 CDD AdoMet_MTases 187 287 - -
Lele22g0721 554 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 151 487 IPR029063 -
Lele22g0721 554 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 111 492 IPR025799 GO:0016274|GO:0018216
Lele22g0721 554 MobiDBLite consensus disorder prediction 528 554 - -
Lele22g0721 554 Pfam Ribosomal protein L11 methyltransferase (PrmA) 184 257 - -
Lele22g0721 554 Gene3D - 290 507 - -
Lele22g0721 554 MobiDBLite consensus disorder prediction 531 554 - -
Lele22g0721 554 FunFam Probable histone-arginine methyltransferase CARM1 128 288 - -
Lele22g0721 554 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 141 483 IPR025799 GO:0016274|GO:0018216
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0721 Lele-ChrLele22 4740438 4745968 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0721 148 494 C2H2 Transcription Factor Family AT3G12270 29.620 1.18e-33 133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g0721 22 4740438 4745968 Lele23g1304 23 18253043 18258499 hybridization
Lele22g0721 22 4740438 4745968 Lele24g0716 24 4777082 4782586 hybridization