Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0699 ATGGCTGTTATTTCGTTATCTGGGATCCTCCTAGTGGCCATGGTGGCGGTTGCGTCGGCGGAGGATCACGGTCATTTATCGGTGTCTCAAAAGAACGTGGACATGCTCTGCAGTTCAACCCAATACAAAAAAACCTGCCAGCACAGCCTCGAAAAAGCATCCAACGGCACCACTGACGTTAAAGAACAGATCAAAGCCACCTTCCACGCCGCCGCCAAGGAGTTCAAGAAGTTCATCGACAACTCCACCCTCTTCCAAGAGCTTGCCAAGGACAACATGACCAAACAGGCCATGGAAATCTGCCACGAGGTGCTAGATTACGCCATTGACGACGTCAGGAACTCCATCGATAGCGTGGACCAGTTCGATATAAGCAAGCTACGTGAATACGCTTATGACGTTAAGGTGTGGCTCGGAGGCACTATCTCCCACCAACGCACCTGCTTGGACGGCTTCGAGAACACAACCACTCACGCCGCAGAGACCATGGCCAAGGTGTTGAACACCTCCCTCGAGCTCAGCAAGAACGCTTTGGACATTATTTCTGGCCTCTCCGACATTTCCCAAGCCTTTGGATTCATCGGTTTTGGCTTCGGCGGCCTGCAGCATCATGCTGATAACAACACCGGCGGCCAGCAAGCACAAGGCAATGAAAACACCACCGGTCGGAAGATTCTCGAGAGCTCGCCGTCCTGGGTAAGTGATAGCCAACACCGTCACCTCCTCGCCGCAGCCACAGCTGGTGGTGCCGCCAATATTAAGCCCGATGCTGTTGTGGCCCAAGACGGGAGTGGGCAGTTCAAAACACTCACCGATGCTATTAAAAGTGTTCCAAAGAAAAATATGAAACCCTATGTGATTTACGTGAAGGCCGGCATATATAAGGAGATTGTGAACATTCCCAAGACTTCCAGTTATATCACCATCGTCGGAGATGGTCCCAGCGCCACCAGATTCACCGGTAGTCTCAACTATGCCGACGGCGTCCAAACTTACAACACCGCAACATTCAGCGTGAATGCTCCATTCTTCACGGCCATGCACGTAGGGTTCGAGAACACAGCAGGAGCAATTAAGCACCAAGCCGTGGCGCTCCGAGTAACAGCAGATAAAGCCATCTTCTACAACTGCCACATGGACGGGTACCAAGACACCCTCTACGCGCAGTCCCACCGTCAGTTCTACCGCGACTGCGTCATCTCCGGCACAATCGACTTCATCTTCGGCGACGCGGACATGATCTTCCAGAACTGCACTTTGGTCGTCAGGCCCCCTTTAAGCACCCAGAACTGCATCGTCTCCGCCAGTGGCCGCGACGTGAGCAACAGCCCCAGCGCCATGGTGTTCCAGAGCTGCCGCTTTATCGCCGACCCTCTCTACCTTTCCGACAAAGCGAAGAAGCCGGCATACCTTGGGCGACCATGGAGGGCATACGCCAAGGTGATTATCATGGATTCTTATATCGACGGCTTATTCGCTCTCGAGGGTTACATGTCGTGGATGGGTAGCATCTATCACATGACCTCCATCTTCAACGAGTACAACAACAAAGGTCCCGGAGCCGATACCTCTCACAGGGTGAAATGGCCCGGCGTGAAGACTATCACTTCTGCTCAAGCTGGAAATTACTATCCTCACAATTTCTATGAATTCCGCAATGCAACTAACGCTGATGATGATTCCTGGATCCATGCCTCTGGGATTCCCTACGCCGTTGGCCCCATGGCCGTACCATCAAATTGA 1743 0.5278 MAVISLSGILLVAMVAVASAEDHGHLSVSQKNVDMLCSSTQYKKTCQHSLEKASNGTTDVKEQIKATFHAAAKEFKKFIDNSTLFQELAKDNMTKQAMEICHEVLDYAIDDVRNSIDSVDQFDISKLREYAYDVKVWLGGTISHQRTCLDGFENTTTHAAETMAKVLNTSLELSKNALDIISGLSDISQAFGFIGFGFGGLQHHADNNTGGQQAQGNENTTGRKILESSPSWVSDSQHRHLLAAATAGGAANIKPDAVVAQDGSGQFKTLTDAIKSVPKKNMKPYVIYVKAGIYKEIVNIPKTSSYITIVGDGPSATRFTGSLNYADGVQTYNTATFSVNAPFFTAMHVGFENTAGAIKHQAVALRVTADKAIFYNCHMDGYQDTLYAQSHRQFYRDCVISGTIDFIFGDADMIFQNCTLVVRPPLSTQNCIVSASGRDVSNSPSAMVFQSCRFIADPLYLSDKAKKPAYLGRPWRAYAKVIIMDSYIDGLFALEGYMSWMGSIYHMTSIFNEYNNKGPGADTSHRVKWPGVKTITSAQAGNYYPHNFYEFRNATNADDDSWIHASGIPYAVGPMAVPSN 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0699 580 Gene3D - 253 575 IPR012334 -
Lele22g0699 580 PANTHER PECTINESTERASE 7 564 - -
Lele22g0699 580 CDD PMEI-like_3 36 185 - -
Lele22g0699 580 Pfam Pectinesterase 256 548 IPR000070 GO:0030599|GO:0042545
Lele22g0699 580 TIGRFAM PME_inhib: pectinesterase inhibitor domain 9 184 IPR006501 GO:0004857
Lele22g0699 580 FunFam Pectinesterase 29 185 - -
Lele22g0699 580 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 185 IPR035513 -
Lele22g0699 580 SUPERFAMILY Pectin lyase-like 253 570 IPR011050 -
Lele22g0699 580 ProSitePatterns Pectinesterase signature 2. 400 409 IPR033131 -
Lele22g0699 580 Pfam Plant invertase/pectin methylesterase inhibitor 33 180 IPR006501 GO:0004857
Lele22g0699 580 SMART PMEI_2 28 180 IPR006501 GO:0004857
Lele22g0699 580 FunFam Pectinesterase 4 253 574 - -
Lele22g0699 580 ProSitePatterns Pectinesterase signature 1. 281 300 IPR018040 -
Lele22g0699 580 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 184 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0699 Lele-ChrLele22 4583578 4585404 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0699 3 576 Carbohydrate Esterase AT3G05610 41.197 2.02e-166 487