Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0698 ATGACCAGATATCCGCCGCCGCTTTTCTCTGTTATTGCCTGGGGTGGCGCTAAGTGGCTAAGAGATGAAGCCGTAAGCGTGAATGCTCCTTACTTCACGGCCATGCACGTAGGGTTCGAGGACACCGCCGGAGCAACAAAGCACCAGGCCGTGGCGCTCCGAGTAACAGCAGATAAAGCCATCTTCTACAACTGCCACATGGACGGGTACCAAGAAACTCTCTACGCGCAGTCCCACCGTCAGTTCTACCGCGACTGCGTCATCTCCGGCACAATCGACTTCATCTTCGGCGACGCGGATATGATCTTTCAGAACTGCACTTTGGTCGTCAGGCCACCTTTAAGCAACCAGAACTGCATCGTCTCCGTCAGTGGCCGAGACGTGATTAACAGCCCCAGCGCCATGGTGTTCCAGAGCTGTCGCTTCACCGCCGACCCTCTCTTCCTCTCCGACAAAGCGCAGAAGCCGGTATACCTTGGACGACCATGGAGGGCATACGCCAAAGTGATTATCATGGATTCTCAGATTGACAGCATCTTCGCTCCCGAAGGTTACATGTCGTGGATGGGAAGCATCTATCACTTGACCAGCGTCTTCAACGTGTACAACAACAAAGGTCCCGGCGACGATAAGTCTCACAGGGTGACATGA 651 0.5438 MTRYPPPLFSVIAWGGAKWLRDEAVSVNAPYFTAMHVGFEDTAGATKHQAVALRVTADKAIFYNCHMDGYQETLYAQSHRQFYRDCVISGTIDFIFGDADMIFQNCTLVVRPPLSNQNCIVSVSGRDVINSPSAMVFQSCRFTADPLFLSDKAQKPVYLGRPWRAYAKVIIMDSQIDSIFAPEGYMSWMGSIYHLTSVFNVYNNKGPGDDKSHRVT 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0698 216 Gene3D - 10 216 IPR012334 -
Lele22g0698 216 Pfam Pectinesterase 22 215 IPR000070 GO:0030599|GO:0042545
Lele22g0698 216 SUPERFAMILY Pectin lyase-like 15 216 IPR011050 -
Lele22g0698 216 ProSitePatterns Pectinesterase signature 2. 88 97 IPR033131 -
Lele22g0698 216 PANTHER PECTINESTERASE 24 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0698 Lele-ChrLele22 4579958 4581238 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0698 15 215 Carbohydrate Esterase AT5G49180 45.771 3.60e-68 217