Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0692 ATGGGGAATATGGCGGATTCTTTGCCTAAAACTAGTAGTACAGTTCAAAGCAATGGAAGTTGGGGATCCTCTGGGCATAGGGGGAGCTATACCAGCGGCTACAATAGGAATAGCACTATGAGCTCGAATAAAAGCACCAATCTTGGGGGTCCTTCATTGCGCAGTATGAATGTTGGAGGTGGTGCAACCTGTAGTGGAATGAGTTATAATAAAGATCCATTTGGTTCTTTGGCTGGTTTTGGATCCAAACAGTCTGGTAGTCTTAATTCAGCTAGCAAAGCAAAAGAGAATGATACAGGCGATGATGGTTTTGGACATTTTCAGAGTGATTCCAAACCGAGCTCTACTGCATTCCCATCAAGTTGTTCGACAGCAAATAGTATCAATCTTAATGGATCTGCGTCTTTGAGCCAGAAACCTGTGCAAACTTCTGGACAGCCTTCTTCAGAAGGTGATGATCGGGGCGTAGATTCTGAATTTGCTGGGGGTGGCCATGATGTGGGTGGAACAACCACTGAGCTTGAAGGACTTCCCCCTCCTCCTGCGGGTATATCTGGTTCCGCAGCAAAACGTAAGGGGTTGGACAATTACAAGCAGGGACAATTTGCTGATGCTATAAAGTGGCTTTCCTGGGCTGTCATCCTTCTTGAGAAATCAGGTGATAATGCAGGCACTACGGAAGTTTTGTCATGCAGGGCTTCGTGTTTCAAAGAAGTTGGGGAGTACAAGAAAGCAGTAGCAGATTGTACGAAGGTGCTTGAGAGTGATGAAACAAACGTATCCGTTCTTGTACAACGTGCTCTTTTGTATGAGAGTATGGAAAAGTACAGACTTGGTGCTGAAGACCTGAGAACAGTTCTGAAGATTGATCCTATTAATAGGGTTGCAAGAAGTACCATTCACCGATTGAATAGGATGGCTGATTAG 927 0.4488 MGNMADSLPKTSSTVQSNGSWGSSGHRGSYTSGYNRNSTMSSNKSTNLGGPSLRSMNVGGGATCSGMSYNKDPFGSLAGFGSKQSGSLNSASKAKENDTGDDGFGHFQSDSKPSSTAFPSSCSTANSINLNGSASLSQKPVQTSGQPSSEGDDRGVDSEFAGGGHDVGGTTTELEGLPPPPAGISGSAAKRKGLDNYKQGQFADAIKWLSWAVILLEKSGDNAGTTEVLSCRASCFKEVGEYKKAVADCTKVLESDETNVSVLVQRALLYESMEKYRLGAEDLRTVLKIDPINRVARSTIHRLNRMAD 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0692 308 MobiDBLite consensus disorder prediction 1 189 - -
Lele22g0692 308 MobiDBLite consensus disorder prediction 108 151 - -
Lele22g0692 308 SUPERFAMILY TPR-like 188 300 IPR011990 GO:0005515
Lele22g0692 308 SMART tpr_5 226 259 IPR019734 GO:0005515
Lele22g0692 308 SMART tpr_5 260 293 IPR019734 GO:0005515
Lele22g0692 308 SMART tpr_5 186 219 IPR019734 GO:0005515
Lele22g0692 308 MobiDBLite consensus disorder prediction 80 94 - -
Lele22g0692 308 MobiDBLite consensus disorder prediction 1 64 - -
Lele22g0692 308 Gene3D Tetratricopeptide repeat domain 186 307 IPR011990 GO:0005515
Lele22g0692 308 PANTHER OS03G0340700 PROTEIN 1 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0692 Lele-ChrLele22 4537526 4538985 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0692 185 304 Calmodulin-binding Proteins AT3G25230 30.000 5.11e-09 55.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g0692 22 4537526 4538985 Lele22g0692 22 4537526 4538985 ECH
Lele22g0692 22 4537526 4538985 Lele23g1336 23 18458717 18460676 hybridization
Lele22g0692 22 4537526 4538985 Lele24g0689 24 4574563 4576519 hybridization