Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0689 ATGGTGTCGTTGAAGCTTCAGAAGCGGCTAGCCGCCAGTGTACTCAAGTGCGGGAAAGGAAAGGTCTGGCTTGACCCCAATGAAGTCAGCGAGATTTCCATGGCCAATTCCAGATTTTTGTGTCTTATTGGAGATCTAGCTGGTGAAATTCTCTTTCTTGTCTGGATTGTAAGCTGTCAGATCCAAGTCAGCTTCTTATATTGCCTAGGTCTTGATGGTAAGCGTAAGGGTACTGGGGAAGCACGACTCCCTACAAAAATACTGTGGATGAGGAGAATGCGTGTGCTGAGGCGCCTGCTTCGCAAGTATCGTGAAGCTACAAAAATTGACAAGCACATGTACCATGACATGTACATGAAGGTAAAAGGTAATGTCTTTAAGAACAAGCGTGTCTTAATGGAGAGCATCCACAAAACCAAGGCAGAAAAGGCCAGAGAGAAGACTCTGTCTGACCAATTTGAGGCCAAGCGCGCCAAGAGCAAGGCAAGCAGGGAGAGAAAGCTGGCTAGGAAAGAGGAGCGGTTGGCACAGGGACCTGGAGAGAGAGCACCTCAGGCAACATCACAACCACAGGCTGAGTAA 582 0.4828 MVSLKLQKRLAASVLKCGKGKVWLDPNEVSEISMANSRFLCLIGDLAGEILFLVWIVSCQIQVSFLYCLGLDGKRKGTGEARLPTKILWMRRMRVLRRLLRKYREATKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKTKAEKAREKTLSDQFEAKRAKSKASRERKLARKEERLAQGPGERAPQATSQPQAE 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0689 193 Pfam Ribosomal protein L19e 72 139 IPR000196 GO:0003735|GO:0005840|GO:0006412
Lele22g0689 193 Pfam Ribosomal protein L19e 4 38 IPR000196 GO:0003735|GO:0005840|GO:0006412
Lele22g0689 193 Gene3D - 1 51 IPR015972 GO:0003735|GO:0005840|GO:0006412
Lele22g0689 193 MobiDBLite consensus disorder prediction 143 178 - -
Lele22g0689 193 ProSitePatterns Ribosomal protein L19e signature. 7 26 IPR023638 -
Lele22g0689 193 PANTHER 60S RIBOSOMAL PROTEIN L19 1 38 IPR039547 GO:0003723|GO:0003735|GO:0022625
Lele22g0689 193 Gene3D - 71 183 - -
Lele22g0689 193 FunFam Ribosomal protein L19 69 187 - -
Lele22g0689 193 SUPERFAMILY Ribosomal protein L19 (L19e) 3 38 IPR035970 GO:0003735|GO:0005840|GO:0006412
Lele22g0689 193 SMART Ribosomal_L19e_2 3 140 IPR000196 GO:0003735|GO:0005840|GO:0006412
Lele22g0689 193 MobiDBLite consensus disorder prediction 143 193 - -
Lele22g0689 193 FunFam Ribosomal protein L19 1 45 - -
Lele22g0689 193 SUPERFAMILY Ribosomal protein L19 (L19e) 73 138 IPR035970 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0689 Lele-ChrLele22 4514979 4517350 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0689 1 180 Cytoplasmic Ribosomal Protein Gene Family AT3G16780 71.277 6.12e-86 250