Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0687 ATGAGTGCAAGTAAATATATATTTACACATATAACTTCAGCTGAGTCATCTTTCAGTTCCTCAGATTTTGAAGGCAACGCAAGCAACACTTTTCTCCTACATCAATATTACTGGGATTCAAAGTGTGATTGGAATATAGTGGTGGTCACCATGGTTCTCTTTCCATCTCTGTTTAATGGATTGGCGAGAACTGTGTCATTCAGAAGAGAAAAGAATAGTCCAAAGGATGGAGAAGATGGAAGGAAAGTTGTGGAAGCATTGGCCAAAGAAGCAAAGAAGAATGAACTGTTATTGAGTTCTTCTGGAACTGTAAAATCCCATAAAGCTAACACTTTTGCTTCTGTCATCTCCAAGAGAGGCACAAAAGGAACCAATCAGGATCGTCTTGCTGTTTGGGAGGGATTTGGTTGCCAAGATGACATGATCTTCTGTGGGATATTTGATGGACATGGGCCTTGGGGACATTTTGTGGCCAAAAGGGTGAGAGAATTAATACCTGTTTCTTTACTCTGCAACTGGCAAGAAGCTTTGGCTGCAACATCACTTGATCTGGATTTTAAACTGGAAGAAGACAGAAACCTTCATTGGTTTGACCTATGGAAGCAATCTTACTTAAAGACTTGTGCTGCTGTGGATCAGGATCTGAAGAACCATGCCCGCTTTGATTCCTTTCAAAGTGGTGCTACTGCTTTGACAATTATTAAACAGGGTAAACTTCTCACCATAGCAAATTTAGGTGATTCTAGGGCTGTCTTGGCAACTGCTTCAGAGGATGTTGATGGAACACTGATTCCTCTTCAACTTACCACTGATTTGAAGCCAAACTTACCAGGGCTTGCCATTTCAAGAGCCTTTGGTGATTACTGTGTCAAGGACTTTGGACTCATCTCTGTATGGGATGTTATTTCTAACGATGAAGCAGTGAAGATTGTATCCTCAGTGCCTCATAAGGAAAAAGCAGCTCAGAGACTGGTTCGATCTGCTGCATACGAATGGAAACGGAAGAGAAGAAACATGGCCATGGATGACATTCTCCGGCGACCATCTCCGATTTCCATGTCCTCCGATGGCATCCGATCAGCTTCTCCGGCTAACAAGATGGATATCCGGGAACTGAAAGATGAATCCGATTTTGAAACTCTTCTGTCACCCGATGGCTACCTGTCCATCTGCGGCTTCGGATCCCTCCCATCCGGTACGTACAATAATACAGTTACACTTTGCATTCGTCAACTAGTTGCGAGGTTGAATGAGTTTCGACGGGTGTATGCTCACGTAGCCCCGGTTTTCTTTGAGCGTGGCATTGCCAAGCCAGAAACTAAGGAAATTTCCAGCTTGAGTGTGGAGCCATGTGAAGGAGAAACTCTTATTGTAACAGTCTTTGAGATCACAAAATCAGAGTTTGAGATGTTCAAATGTTCGATCAAGTTCTTCCTGAAACGCTTGATGGGACACCTTTTGACTATCCAGCGGTCCTTTGTGCCCGTTATAGCGATGAAGAGTTCTTCAACATTAGATGTAAAGATCGTTTCATTTATTGTTGGTGGATACTTTTTCCTACACGGAGCAAGGAAATCTATTTTCAGCAATATGGACGGTGGAATATTGACAGGATTTGGAGAGATGATGTCTTACCTTGTCGTGTTTATCTTCGACACTGGTAAAAAGTTTGATAGTTATGTGTTTATATCTTCTAAATAG 1701 0.4227 MSASKYIFTHITSAESSFSSSDFEGNASNTFLLHQYYWDSKCDWNIVVVTMVLFPSLFNGLARTVSFRREKNSPKDGEDGRKVVEALAKEAKKNELLLSSSGTVKSHKANTFASVISKRGTKGTNQDRLAVWEGFGCQDDMIFCGIFDGHGPWGHFVAKRVRELIPVSLLCNWQEALAATSLDLDFKLEEDRNLHWFDLWKQSYLKTCAAVDQDLKNHARFDSFQSGATALTIIKQGKLLTIANLGDSRAVLATASEDVDGTLIPLQLTTDLKPNLPGLAISRAFGDYCVKDFGLISVWDVISNDEAVKIVSSVPHKEKAAQRLVRSAAYEWKRKRRNMAMDDILRRPSPISMSSDGIRSASPANKMDIRELKDESDFETLLSPDGYLSICGFGSLPSGTYNNTVTLCIRQLVARLNEFRRVYAHVAPVFFERGIAKPETKEISSLSVEPCEGETLIVTVFEITKSEFEMFKCSIKFFLKRLMGHLLTIQRSFVPVIAMKSSSTLDVKIVSFIVGGYFFLHGARKSIFSNMDGGILTGFGEMMSYLVVFIFDTGKKFDSYVFISSK 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0687 566 SUPERFAMILY PP2C-like 103 343 IPR036457 -
Lele22g0687 566 SMART PP2C_4 103 344 IPR001932 -
Lele22g0687 566 ProSiteProfiles PPM-type phosphatase domain profile. 112 351 IPR001932 -
Lele22g0687 566 CDD PP2Cc 112 344 IPR001932 -
Lele22g0687 566 Gene3D - 98 344 IPR036457 -
Lele22g0687 566 PANTHER OS05G0358400 PROTEIN 348 471 - -
Lele22g0687 566 Pfam Protein phosphatase 2C 121 276 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0687 Lele-ChrLele22 4494891 4502328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0687 51 344 PP2C-type Phosphatase Gene Family AT3G05640 48.711 8.63e-112 336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g0687 22 4494891 4502328 Lele23g1340 23 18484052 18496438 hybridization
Lele22g0687 22 4494891 4502328 Lele24g0684 24 4536339 4539987 hybridization