Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0684 ATGGGGAGAATGGGACAAGAAGAATCAGATTTGAAAACGCAGTTAGTTCTGGACATCTGCTCCATCTCTACTCGCTCTGTGTTCTGCGTTCATAGGCTTCTCTCGAACCCAGCTAACCCACCTTCTTTCGTCGATTGGTATCACATTCTTGGAGTGGAAGAAAATGCAGGGTCAAATACCATTCGCAAGCGATACCATAAGCTGGCTTTGCAACTTCACCCAGATAAGAATAATCATCCCAAGGCTGAAATTGCGTTCAAGCTTCTCTCCGAGGCATATACATGTTTGTCTGATGCCGCAAAGAGAAAAGCCTTTGAGTTAGAGAGGTGGAAGAACTTCTGCTTTGAGTGCAAAAAGATCCCATACTCATCATCTGGCAGTGTCCCTCGCAATTCCAATGGTGGTTCAGGTTTCAAGGTATGGAATATTATCAGCAGGTCAAGATCCTATAAGCTTTGGAGAAATATAAAGGAGATTAGAGAAAGATTCAAGGAGGAAGCCAAGGTAATAGAGAACTGTTTGAGGGCAAATTCAATGTCCAGGAAAGAATCTCCACTTTTCAATCCAGTAGATTATTTACAAAGAAGCAAGTCTCAACAACACAGGACAGAGAGAGAAACCCCTGTGTTCAACCCATCAGATTACTTGTACCACGGCTATCCTCATCTGAGAAGCCAAATTTTCAAGAATTCTGATAAGTTTTGGTACTTGCAGAATCAAAATAGTATAATGCATGATAGAAGAGGAGCCCAATATGACTCCCCACTTTTTGAAGTCAGACCAAAAAGGAGAATGTTCGCCAGCAAATTTGCTTATGTCCCCTCATGA 828 0.4215 MGRMGQEESDLKTQLVLDICSISTRSVFCVHRLLSNPANPPSFVDWYHILGVEENAGSNTIRKRYHKLALQLHPDKNNHPKAEIAFKLLSEAYTCLSDAAKRKAFELERWKNFCFECKKIPYSSSGSVPRNSNGGSGFKVWNIISRSRSYKLWRNIKEIRERFKEEAKVIENCLRANSMSRKESPLFNPVDYLQRSKSQQHRTERETPVFNPSDYLYHGYPHLRSQIFKNSDKFWYLQNQNSIMHDRRGAQYDSPLFEVRPKRRMFASKFAYVPS 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0684 275 SUPERFAMILY Chaperone J-domain 39 108 IPR036869 -
Lele22g0684 275 Gene3D DnaJ domain 44 169 IPR036869 -
Lele22g0684 275 ProSiteProfiles dnaJ domain profile. 45 109 IPR001623 -
Lele22g0684 275 CDD DnaJ 45 98 IPR001623 -
Lele22g0684 275 Pfam DnaJ domain 45 105 IPR001623 -
Lele22g0684 275 SMART dnaj_3 44 101 IPR001623 -
Lele22g0684 275 PANTHER BNAC03G44070D PROTEIN 24 241 - -
Lele22g0684 275 PRINTS DnaJ domain signature 118 137 IPR001623 -
Lele22g0684 275 PRINTS DnaJ domain signature 47 65 IPR001623 -
Lele22g0684 275 PRINTS DnaJ domain signature 81 101 IPR001623 -
Lele22g0684 275 PRINTS DnaJ domain signature 65 80 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0684 Lele-ChrLele22 4479413 4480647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0684 45 106 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 42.424 3.11e-09 55.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g0684 22 4479413 4480647 Lele22g0684 22 4479413 4480647 ECH
Lele22g0684 22 4479413 4480647 Lele23g1343 23 18510845 18512350 hybridization
Lele22g0684 22 4479413 4480647 Lele24g0681 24 4515627 4517891 hybridization