Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0660 ATGCCAGCACTTGTTGAAGATGCAATAATAAGATCCAAGAAAGTATCAACGGGAAGAGCTCCTTGCTGTGATAAAGTGGGTCTGAAGAAAGGAAGATGGACTTCTGAGGAAGATAAACTCTTGAGCGACTATATTCAACAGCACGGGGAAGGCTCTTGGAGATCCTTGCCCAAAAATGCAGGGTTATTGAGGTGTGGGAAGAGTTGCAGACTGAGATGGATAAACTATTTGAGAGAAGATGTGAGGAGAGGAAACATCACTGCTCAGGAAGAGGCCATGATTGTGAAGCTTCACGGGGCCATCGGTAATAGGTGGTCTGTAATAGCGAGGCATCTACCAGGAAGAACAGATAATGAGATAAAGAATTATTGGAACTCTCATTTGAGAAGAAAAATTTACTGTTTCATGAAACCCTCAAACTCCGACGACACTCTCCCACCGATTGACATTGCTGCTCTGAACGCAGCTGTTTCATTCAAACGAGGAAGAGGTGGTCGAGGAAGACCAACTCAAGCACCCATGCGAGAGGAGGATAAGAACAATATCACTTCAAACCAATACTCGCGCTCCCATAGGAATGCTCACGATCTGTTTGACAAAATGCATCCGAGAAAAGCAAACCCAGATGAAGCTGAGACAATTTCAATGATGGGTTCTAGATCTTGGAGCCAGAATCAGCAAGAAGAGATCGTTGATGGCATTGATTTGGATGCATATTGTGAGATGAGTAGTGATGATGCAAATGGCAAAGCAGCAGCATTTTGCCCCAACATGGATGGAGAAGGTGAGGCCTTCGGTTCATTTCAATGGCTAGATGATGAAGTAATGAAACTTAATTACATGTTTGAAAGTGGGATTCTTGTGAACCCAACCAGTAGTGGAAATAACAGTATGGGAAGAGAATATGGCTATGGAGTGGTGGGTGGAGGTAATAAGGAGATGAATATTCCAACAAGCGAGGAAAGTAAAAGTGGTGGTTGGAGCTCAGTATCAAATTACACAGAGAGTTCATCATCAGGGAATTCTGTTTATGATTATCAGTGGGTTGATTGGGATATTTCAGCTAGCGCTCAGTCCCATAATCAATGCAACCTCCAGTACTCTGAAGAAAGCCAGATGATGACTTGTTTGTGGGATGCCACTGCAAATGGTGAAGTAAATAACTTCCACTGA 1173 0.4331 MPALVEDAIIRSKKVSTGRAPCCDKVGLKKGRWTSEEDKLLSDYIQQHGEGSWRSLPKNAGLLRCGKSCRLRWINYLREDVRRGNITAQEEAMIVKLHGAIGNRWSVIARHLPGRTDNEIKNYWNSHLRRKIYCFMKPSNSDDTLPPIDIAALNAAVSFKRGRGGRGRPTQAPMREEDKNNITSNQYSRSHRNAHDLFDKMHPRKANPDEAETISMMGSRSWSQNQQEEIVDGIDLDAYCEMSSDDANGKAAAFCPNMDGEGEAFGSFQWLDDEVMKLNYMFESGILVNPTSSGNNSMGREYGYGVVGGGNKEMNIPTSEESKSGGWSSVSNYTESSSSGNSVYDYQWVDWDISASAQSHNQCNLQYSEESQMMTCLWDATANGEVNNFH 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0660 390 Gene3D - 29 82 - -
Lele22g0660 390 SUPERFAMILY Homeodomain-like 27 124 IPR009057 -
Lele22g0660 390 FunFam Myb transcription factor 27 83 - -
Lele22g0660 390 SMART sant 82 130 IPR001005 -
Lele22g0660 390 SMART sant 29 79 IPR001005 -
Lele22g0660 390 CDD SANT 87 128 IPR001005 -
Lele22g0660 390 Gene3D - 87 132 - -
Lele22g0660 390 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 25 77 IPR017930 -
Lele22g0660 390 ProSiteProfiles Myb-like domain profile. 25 77 IPR001005 -
Lele22g0660 390 ProSiteProfiles Myb-like domain profile. 78 128 IPR001005 -
Lele22g0660 390 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 78 132 IPR017930 -
Lele22g0660 390 CDD SANT 32 77 IPR001005 -
Lele22g0660 390 Pfam Myb-like DNA-binding domain 30 77 IPR001005 -
Lele22g0660 390 Pfam Myb-like DNA-binding domain 83 128 IPR001005 -
Lele22g0660 390 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 18 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0660 Lele-ChrLele22 4359353 4363910 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0660 18 258 MYB Transcription Factor Family AT5G49330 45.769 9.41e-69 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele22g0660 Myb_DNA-binding 5.7e-14 CL0123