Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0647 ATGGAGAAACTGAGAAGAAGAAAGAACAGAGTGGCGAGCAGGACTTTCACCTCTCCTCTGTATTTCGGTGCGTCATTTCGAATCCTGCATTTCGCTACCGGTCATGATCTCCTTGTTTCGTTCACCCTTTCTTCTATCGAGTTTTCAATTTTGTGTGTTTTGATTGCAGAGATGGCGAAGTCGAAGAACCACACAGCTCACAACCAGTCCTACAAGGCCCACAAGAATGGTATCAAGAAGCCAAAGAGGCATCGCCATACTTCCACCAAAGGGATGGATCCCAAGTTTTTGAGGAACCAGAGGTATGCCAGGAAGCATAACAACAAGAGTGCTGAAGCATCCGCGGAGGAAGAGTAA 357 0.4678 MEKLRRRKNRVASRTFTSPLYFGASFRILHFATGHDLLVSFTLSSIEFSILCVLIAEMAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNNKSAEASAEEE 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0647 118 Pfam Ribosomal L29e protein family 60 99 IPR002673 GO:0003735|GO:0005840|GO:0006412
Lele22g0647 118 MobiDBLite consensus disorder prediction 63 118 - -
Lele22g0647 118 Gene3D - 58 118 - -
Lele22g0647 118 MobiDBLite consensus disorder prediction 67 89 - -
Lele22g0647 118 PANTHER 60S RIBOSOMAL PROTEIN L29 58 116 IPR002673 GO:0003735|GO:0005840|GO:0006412
Lele22g0647 118 MobiDBLite consensus disorder prediction 97 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0647 Lele-ChrLele22 4275458 4276209 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0647 58 118 Cytoplasmic Ribosomal Protein Gene Family AT3G06680 83.607 5.97e-32 105
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g0647 22 4275458 4276209 Lele22g0647 22 4275458 4276209 ECH
Lele22g0647 22 4275458 4276209 Lele23g1381 23 18730338 18732080 hybridization