Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0628 ATGGTGGAGAGAGAGAGGGAAGAAGAAGTGGTGATAAGGGAATTCGAGGAAGAAAGAGATGTGAAAGTGGTGGGGAAGCTTGAGAGAAACTGTGAGATTGGGAATAAAGAGAGGGTCTCCATTTTTACCAACTTGCTCGCCAATCACCCTTTTTCTAGGATTTGCTTCTACCCTCTTCGTCTCATCTTGGTGGCTGAGGTGGTAGAAAGTGGTGAGATTGTAGGGGTGGTTCGAGGATGCATTAAGACAATAGGGTCTCGTTCGGGATCACTCTTTAAGATAGGTTCTATACTTGGCCTTCGGGTCTCTCCTACTTTTCGAAGAAAAGGGGTGGGACAAAAACTAGTGAACTCAGTTGAAGAATGGATGCTAAGAAATGGAGCAGATTACTCATTCGTAGCGACAGAGAAGAGCAACACTGCCTCCACTAACCTCTTCTCCCTCAAATGCCACTACCTCAACCTCACTTCTCTCCACATTTTCGTCCACCCCACTACTTTCCCTCACAAGCACATCTCCGCCGCAGCTGCCACCGGAGCCGACTCCGCCCCCAGCAGACAGGTCAAAGTACAGAAGCTCAACATAGCCCAAGCCATCTCTTTGTACACCAGAACCTTAAAACACAAAGACCTATATCTCACAGATATGGACCTTATCTTGAAGGAGAAGCTCAGCCTAGGAACATGGGTAACTTACTACAAAGACGATGGCAATTGGGAACTCGACAATGATCAAACTAGTAATAATAATGTTCCAAACTCTTGGATTGTGTTTAGCATATGGAAAAATACATGTGAAGCCTATAAGCTTCAGGTTAGGTCAAAGTCGTATAAGCCATTATTTAGGGTTTTAATTCACAGGACTCTGAAGCATGCAAGAGAGAAGATCTTCCCTTGTCTGAGAATCCCTGTGAGCGGCGACTCGCTGTCGAGGAGGAGGCCGTTTGGGTTTCTGTTCATATACGGGCTTCATGGGGAAGGAGACAACCTGGGAGAACTCATGGAATGTGCGTGGAGGTTCACGTCGAGGTTGGGAGAAAGCATGAAAGACTGTAAAGTGGTTATAACAGAGTTAGGGTTTGGTGATCCTCTTGCGAAGCTTGTGCCTCAGACAGCTTCCATGTCTTGTATCGATGATCTGTGGTATGTTAAGAGGCTTTCAGGACAGAGTAGTGATGAGAACGAGGATGATCAAGTGTTGATGAAGGGACAAGTGAGGGATGCGTTTGTTGATCCTAGGGATTTTTAG 1248 0.4607 MVEREREEEVVIREFEEERDVKVVGKLERNCEIGNKERVSIFTNLLANHPFSRICFYPLRLILVAEVVESGEIVGVVRGCIKTIGSRSGSLFKIGSILGLRVSPTFRRKGVGQKLVNSVEEWMLRNGADYSFVATEKSNTASTNLFSLKCHYLNLTSLHIFVHPTTFPHKHISAAAATGADSAPSRQVKVQKLNIAQAISLYTRTLKHKDLYLTDMDLILKEKLSLGTWVTYYKDDGNWELDNDQTSNNNVPNSWIVFSIWKNTCEAYKLQVRSKSYKPLFRVLIHRTLKHAREKIFPCLRIPVSGDSLSRRRPFGFLFIYGLHGEGDNLGELMECAWRFTSRLGESMKDCKVVITELGFGDPLAKLVPQTASMSCIDDLWYVKRLSGQSSDENEDDQVLMKGQVRDAFVDPRDF 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0628 415 Gene3D - 1 156 - -
Lele22g0628 415 CDD NAT_SF 62 130 - -
Lele22g0628 415 Pfam Acetyltransferase (GNAT) family 64 147 IPR000182 GO:0016747
Lele22g0628 415 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 6 415 - -
Lele22g0628 415 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 10 225 IPR000182 GO:0016747
Lele22g0628 415 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 8 146 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0628 Lele-ChrLele22 4166265 4168677 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lele22g0628 Acetyltransf_1 5.3e-13 CL0257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g0628 22 4166265 4168677 Lele22g0628 22 4166265 4168677 ECH
Lele22g0628 22 4166265 4168677 Lele23g1407 23 18838852 18842645 hybridization
Lele22g0628 22 4166265 4168677 Lele24g0630 24 4214814 4217159 hybridization