Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0623 ATGGGAACTCCACCACCAGAAGAGCTTCTCAAGAAGATCGAGAGCCTCGAGGCGGGTCACGCACACCTCGAGCAAGAAATGTCCAAGCTCAAGCTCTCGGGGGCCAGCGATGCTCGGGCCGAGCAGAGCCATTATCGCCAGAGGTCGCACTCGATATCGCCGCAGCGTTCGAGATTGGGTACGTCCATGAGGAGAGCCGGAGGTGGCGGATTCGATGGACCGGCTTCGTGGAAGAAAGTTTCGACTTCGTTTAAACATTCATCACCGCTTCAGAGGGAAAGCCGTAGTAGTGATCCTCAAAATGATGGAGAAGGTGGCGTTGGAAGAGGCCCTTCAGCTGTGAATTTTACTGATAAGCAGAACCGCAGTGCTGAACATCTATATGGTTATCCAGTGGAAGAAGCCCTTGGTAAGGATGGCATTGACCTGCTTGTAGACCCCAGGGACTTTTCCCTAGCCAATGATATAGTCAACCGGGTCTCTATGGGAGAGAAATGGATTGGGCAGTTCCCGGTCAAAAATAAGATGGGAGAGAAGTTTTTGGCTGTAGCTACTCATACTCCTTTATATGACGATGATGGAAGTTTGCTTGGCGTTATTTGTGTCTCTAGTGATTCACGACCCTTCCTTGAAGTGAGAGTTCCGTTCTCAGGAGTAAAGCACTTAACAGCTCCAGGCTCCAGCAATCTTAGAAGTAGCATTACAAATAAACTTGTTCTCGATTCGCAACAGCCTCTTCAAGTTGGTATAACATCAAAAGTTACAAATTTGGCATCCAAGGTAAGTAACAAAGTAAAGTCAAGAATCCGAACAGGAGACAATAATATGGATCGTGAAGGTGGGAGTGGAGAAAGTCATCAATCTGAGCATAGCCTCTCAGATTCGGTTCTTACAGAACAGAGAGCAGATGCTAATTCAAGTGGAGCTAGCACACCCAGGGGAGATGTGCTTCCATCTCCCTTTGGTGTATTTTCTAACACCGAAGACAAAAGTCAAGTAAAAAATTTAAGAGATTCTGGTGATGAGGGTGAAGGAAAACCTATTCATAAAGTCTTAACTTCCAAGGCTGAAGCATGGATTCAAAAGAAAACAATGTCATGGCCATGGAAAACAAATGAACGGGATGGGTCAGAGGGAAGGAATGTACGTGTTGATTGGCCTTGGTTGCAGAATGATCAAGAAAATGAGCCAGCTCAGAGGAAGCCTCCTTCTTCTTGTGTGAGGCCAGAAAGTCAGGCTGGAGAAGGTAATCGACCTGTTAGTAATGATGCATCAGGATCCTGGTCCTCCTTCAATGTTAACAGCACAAGTAGTGCAAGCAGCTGTGGGAGTGGCAGCAGTGCTGTCAGTAATAAATTGGACATGGATACTGATTGTTTGGATTATGAAATCTTGTGGGAAGACCTAACTATTGGAGAACAAATTGGGCAAGGATCATGTGGAACTGTGTATCATGCTCTGTGGTATGGATCAGATGTTGCGGTCAAGGTATTCTCCAAGCAAGAATATTCAGATGATGTGATAATGTCCTTCAGACAAGAGGTATCTGTTATGAAAAGACTTAGACATCCAAATGTCCTTCTGTTCATGGGGGCAGTAACTTCACCTCAACGTCTCTGCATTGTGACAGAGTTTCTCCCACGTGGAAGCTTGTTTGGCTTACTCCAGAGAAACACAGCCAAGCTTGACTGGAGACGGCGTGTTCCTATGGCTTTAGATATTGCACGGGGCGTAAACTATCTTCACCATTGCAGCCCACCTATCATTCATCGAGATTTGAAGTCTTCAAATCTTCTAGTTGACAAGAACTGGACTGTTAAGGTCGGTGATTTTGGCCTTTCACGCCTAAAGCATGAAACATATCTCACAACAAAGACAGGAGAGGGCACCCCTCAATGGATGGCACCAGAAGTTCTTCGTAATGAGCCCTCTGATGAGAAGTCTGATGTATACAGCTTTGGAGTGATATTGTGGGAACTTACAACTGAGAAGATCCCTTGGGAGAGTCTTAACTCAATGCAGGTAATTGGAGCTGTTGGGTTCATGAACCAGCGGCTAGAAATTCCAAAGGATGTGGATCCCAAGTGGGCCGCTATAATTGAGAGCTGCTGGCATAGTGATCCAGCCTGCCGGCCAACATTTCAAGAACTGCTGGAAAGGCTTCGAGAGCTGCACCGACGTTATGCCCTTCAATTTCAAGCTGCTCGTACTTCTGGTGTTGAAAACACTCAAAATGAGTCCTAA 2244 0.4608 MGTPPPEELLKKIESLEAGHAHLEQEMSKLKLSGASDARAEQSHYRQRSHSISPQRSRLGTSMRRAGGGGFDGPASWKKVSTSFKHSSPLQRESRSSDPQNDGEGGVGRGPSAVNFTDKQNRSAEHLYGYPVEEALGKDGIDLLVDPRDFSLANDIVNRVSMGEKWIGQFPVKNKMGEKFLAVATHTPLYDDDGSLLGVICVSSDSRPFLEVRVPFSGVKHLTAPGSSNLRSSITNKLVLDSQQPLQVGITSKVTNLASKVSNKVKSRIRTGDNNMDREGGSGESHQSEHSLSDSVLTEQRADANSSGASTPRGDVLPSPFGVFSNTEDKSQVKNLRDSGDEGEGKPIHKVLTSKAEAWIQKKTMSWPWKTNERDGSEGRNVRVDWPWLQNDQENEPAQRKPPSSCVRPESQAGEGNRPVSNDASGSWSSFNVNSTSSASSCGSGSSAVSNKLDMDTDCLDYEILWEDLTIGEQIGQGSCGTVYHALWYGSDVAVKVFSKQEYSDDVIMSFRQEVSVMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRGSLFGLLQRNTAKLDWRRRVPMALDIARGVNYLHHCSPPIIHRDLKSSNLLVDKNWTVKVGDFGLSRLKHETYLTTKTGEGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELTTEKIPWESLNSMQVIGAVGFMNQRLEIPKDVDPKWAAIIESCWHSDPACRPTFQELLERLRELHRRYALQFQAARTSGVENTQNES 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0623 747 ProSitePatterns Serine/Threonine protein kinases active-site signature. 588 600 IPR008271 GO:0004672|GO:0006468
Lele22g0623 747 MobiDBLite consensus disorder prediction 331 350 - -
Lele22g0623 747 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 156 727 - -
Lele22g0623 747 CDD STKc_MAP3K-like 475 721 - -
Lele22g0623 747 ProSiteProfiles PAS repeat profile. 121 164 IPR000014 -
Lele22g0623 747 SUPERFAMILY PYP-like sensor domain (PAS domain) 121 202 IPR035965 -
Lele22g0623 747 SUPERFAMILY Protein kinase-like (PK-like) 456 721 IPR011009 -
Lele22g0623 747 FunFam PAS domain-containing protein tyrosine kinase family protein 547 738 - -
Lele22g0623 747 ProSiteProfiles Protein kinase domain profile. 469 728 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g0623 747 MobiDBLite consensus disorder prediction 387 428 - -
Lele22g0623 747 Gene3D PAS domain 119 208 - -
Lele22g0623 747 FunFam PAS domain-containing protein tyrosine kinase 462 546 - -
Lele22g0623 747 MobiDBLite consensus disorder prediction 286 313 - -
Lele22g0623 747 SMART serkin_6 469 728 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g0623 747 MobiDBLite consensus disorder prediction 80 96 - -
Lele22g0623 747 PRINTS Tyrosine kinase catalytic domain signature 648 670 IPR001245 GO:0004672|GO:0006468
Lele22g0623 747 PRINTS Tyrosine kinase catalytic domain signature 543 556 IPR001245 GO:0004672|GO:0006468
Lele22g0623 747 PRINTS Tyrosine kinase catalytic domain signature 582 600 IPR001245 GO:0004672|GO:0006468
Lele22g0623 747 PRINTS Tyrosine kinase catalytic domain signature 629 639 IPR001245 GO:0004672|GO:0006468
Lele22g0623 747 PRINTS Tyrosine kinase catalytic domain signature 692 714 IPR001245 GO:0004672|GO:0006468
Lele22g0623 747 Coils Coil 13 33 - -
Lele22g0623 747 Gene3D Phosphorylase Kinase; domain 1 462 546 - -
Lele22g0623 747 MobiDBLite consensus disorder prediction 265 350 - -
Lele22g0623 747 Gene3D Transferase(Phosphotransferase) domain 1 547 747 - -
Lele22g0623 747 Pfam Protein tyrosine and serine/threonine kinase 469 721 IPR001245 GO:0004672|GO:0006468
Lele22g0623 747 MobiDBLite consensus disorder prediction 17 116 - -
Lele22g0623 747 MobiDBLite consensus disorder prediction 266 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0623 Lele-ChrLele22 4121640 4128164 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0623 1 743 MAP Kinase Kinase Kinase AT3G06620 58.726 0.0 892
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Lele22g0623 PK_Tyr_Ser-Thr 8.3e-67 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g0623 22 4121640 4128164 Lele23g1412 23 18879820 18886680 hybridization
Lele22g0623 22 4121640 4128164 Lele24g0625 24 4165008 4171591 hybridization