Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0613 ATGGATGAGAAGAGAGGGAAAGAAGAAGAGAGCAGCAGCGAGAGGTGGAAGATGACAAACTTCGTGGCATTTTCCGACGAGATTCCGACCATGAGTAGTTCAAGTCTGATGAGCTTCCCTCAACCTCCTTCTTTCTCATCATCAACCATCTCCGACATGACGACGACGATGATGCCGCTAACGGAGAACGATTACAAGCCTAATTACTCCTCCGCTTTCATGGACTTGCTCGATCTCCAAGATTACAGTCCTTCTTTGTTCGATTGCCTCCCTTCCTCCGACACTTACCACAACCACCACCCTCTTCCGTCGCCGGCGAGCTCCAACGTTCCCGAATCCTCCGAGGTCTTGAACACCACTCCGGCCTCCCCCAATTCTTCCTCCATCTCCTCTTCCTCCAATGAAACCCCCCTCGCCGATCATACCATCATAGACCAGGCCCACCCTAGTGGTAAACAAGAACCTGACGATGAACCACACAGAGATGCAGCCAAAGGAGACGACATGGATCAACACAAGATTAAGAAACAGTTGAAGCCGAAGAAGAAGAACCAGAAGAAGCAAAGAGAGCCCAGATTTGCGTTCATGACAAAGAGCGAAGTCGATCAACTCGACGACGGCTATAGGTGGCGCAAGTATGGCCAAAAAGCCGTCAAAAACAGCCCCTATCCCAGGAGCTATTATCGTTGCACCACCCCCGGTTGCGGTGTGAAGAAGCGGGTGGAGCGGTCGTCGGAGGACCCGTCGATCGTGGTGACGACGTACGAGGGGCAACACACACACCCGAGTCCGGTGACGAACCGGGCGAGCCTGGTCGGATTCGGACCCTCCACGAGGGCCAGTAGTTGTGGCGTGCTTGGTTCGCCACAACAACAGTTTGTGGTGCCACAAGCACAGCATCAGCATCATGTTCAGGAACAAGAGCATGTGCAGCCACAAGACGATGCTTTGTTGTATAATAATAATAGCTCACCCCCGCTTCTTCCTCTGAGTATTACTACTGATCCAAAGGCGTCGCCTTCCTCGTCATTCTCCAGCTTTCACCGTTATCGTCTTCTAGGTTTTGGACCATCCTCCACGACTGCGGCTTCTCTGTTAAGGGACAATGGGCTGCTTCAGGACATTATTCAGATGAGGAAGGAGGAGGAGAAAGAGGAAATAAAAGAAGAATAG 1173 0.5183 MDEKRGKEEESSSERWKMTNFVAFSDEIPTMSSSSLMSFPQPPSFSSSTISDMTTTMMPLTENDYKPNYSSAFMDLLDLQDYSPSLFDCLPSSDTYHNHHPLPSPASSNVPESSEVLNTTPASPNSSSISSSSNETPLADHTIIDQAHPSGKQEPDDEPHRDAAKGDDMDQHKIKKQLKPKKKNQKKQREPRFAFMTKSEVDQLDDGYRWRKYGQKAVKNSPYPRSYYRCTTPGCGVKKRVERSSEDPSIVVTTYEGQHTHPSPVTNRASLVGFGPSTRASSCGVLGSPQQQFVVPQAQHQHHVQEQEHVQPQDDALLYNNNSSPPLLPLSITTDPKASPSSSFSSFHRYRLLGFGPSSTTAASLLRDNGLLQDIIQMRKEEEKEEIKEE 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0613 390 FunFam WRKY transcription factor 57 190 264 - -
Lele22g0613 390 Gene3D WRKY domain 188 265 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele22g0613 390 ProSiteProfiles WRKY domain profile. 199 264 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele22g0613 390 MobiDBLite consensus disorder prediction 150 175 - -
Lele22g0613 390 MobiDBLite consensus disorder prediction 98 198 - -
Lele22g0613 390 SUPERFAMILY WRKY DNA-binding domain 196 264 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele22g0613 390 SMART WRKY_cls 204 263 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele22g0613 390 MobiDBLite consensus disorder prediction 98 140 - -
Lele22g0613 390 Pfam WRKY DNA -binding domain 205 262 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele22g0613 390 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 95 303 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0613 Lele-ChrLele22 4046740 4048315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0613 175 284 WRKY Transcription Factor Family AT2G47260 75.893 4.12e-52 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele22g0613 WRKY 2.7e-27 CL0274