Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0603 ATGGCTGCAAATAAGAGTGTGAATCTCTCTCCCTCTGAAGCCTCTAGCATCTCAGGAGGGTCCAAAGGAGAAAGTTCCAGAGATGAAGTGATCGAAAACCAGAAGATGAAGATGGTTCAAGTTACCAGCAGCGACGATGATTCTCGTTGTAAATCGAAGATCGAGCTGGATTTCTTCAAATCTGAAGTGAATATCATAGGTTCTTCATCATCTAAAACGAATATCAACAACAATGGAAAAGATCGTGAACATGATTATCTTGATGATCATGAGAAGAACACTAGTGCAGAACGGACTTTTTGTTGCAACTTCTGCAAAAGAGAGTTTTCTTCCTCCCAAGCCCTAGGAGGCCATCAAAACGCACACAAACAAGAGCGTGCAATTGCAAAACGACGACAAGCTGGGATTGTTTCTGATAATCATTTTGGTTTCTTAGGGAGTCACTATTATTCTCCACACTATCCTTATTATGGTAATTACCCTACTTATCATCCTAACCCTCTGGTTAACAGCCCTTTGATCAATTATAGCAGGCCACTTGGGGTTAGAATGGACTCCATGATTCATAAACCTTCTTATAATAACCCTAATTTTAGGTTTAGGCATGATCATCAAAACCCAGATAGGTTCGGAGTTAGGGCAAGCTCTGGAACTCTGAGGATTGAAGAAATTGGTGATATTAGCACTCCAAATCGTCATCAGATTGGGCACAATTCATCTTCTTCAACTACTATTGCTACTGTACATGTTACTGCTACTACTGGTGATCAACATATCAAGTTTATACCGGAAAAAGCTCCCAAAGAGGATGATGACGATTTTGATTCTTCGGGTCTTGATTTGTCTCTTAAGCTTTAA 858 0.4009 MAANKSVNLSPSEASSISGGSKGESSRDEVIENQKMKMVQVTSSDDDSRCKSKIELDFFKSEVNIIGSSSSKTNINNNGKDREHDYLDDHEKNTSAERTFCCNFCKREFSSSQALGGHQNAHKQERAIAKRRQAGIVSDNHFGFLGSHYYSPHYPYYGNYPTYHPNPLVNSPLINYSRPLGVRMDSMIHKPSYNNPNFRFRHDHQNPDRFGVRASSGTLRIEEIGDISTPNRHQIGHNSSSSTTIATVHVTATTGDQHIKFIPEKAPKEDDDDFDSSGLDLSLKL 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0603 285 ProSitePatterns Zinc finger C2H2 type domain signature. 101 122 IPR013087 -
Lele22g0603 285 ProSiteProfiles Zinc finger C2H2 type domain profile. 100 127 IPR013087 -
Lele22g0603 285 Gene3D Classic Zinc Finger 76 142 - -
Lele22g0603 285 MobiDBLite consensus disorder prediction 1 23 - -
Lele22g0603 285 MobiDBLite consensus disorder prediction 1 32 - -
Lele22g0603 285 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 10 285 IPR044246 GO:0009788
Lele22g0603 285 MobiDBLite consensus disorder prediction 263 285 - -
Lele22g0603 285 Pfam C2H2-type zinc finger 100 124 - -
Lele22g0603 285 SUPERFAMILY beta-beta-alpha zinc fingers 97 127 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0603 Lele-ChrLele22 3979421 3980959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0603 92 285 C2H2 Transcription Factor Family AT5G01860 34.536 1.58e-18 80.5