LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele22g0597	ATGGATATGGATATGGATATGGATGCTTCAGAAATCAGAGGAGGAAGCTCCAACCTCCAAAACGACGACGATTTGGACCTCCGCAGAGGCCCTTGGACCCTCGACGAAGACCTCACCCTCATCCATTACATTGCCGCTCACGGAGAAGGTCGCTGGAACTCCCTCGCTCGATCCGCAGGCCTGAAACGCACTGGTAAGAGCTGCAGATTGAGATGGCTCAACTATCTCCGGCCGGATGTTCGACGTGGAAACATTACCCTCGAAGAACAGTTCCTGATTCTCGAACTTCATTCTCGCTGGGGAAACAGATGGTCGAAAATCGCCCAGTACTTGCCGGGAAGGACTGACAACGAGATCAAGAACTACTGGAGAACAAGAGTTCAGAAGCAAGCGAAGAAGCTCAAATGTGACGTGAACAGTAAGCAATTCAAGGACACCATGCGTTTCCTCTGGATGCCCAGGCTCGCGGAGCGTATTCAAGCTTCCGCCGCCACCGTCTCCTTTTCTCCGACGGTATCTACCATCACCACCGCCACTCCTCCCAGCGCCGCACACAACTACAACAATTTCGAGTTTTTGGGTGCCTCTCAGTTCACCGGAAGCAACTACGCGACAGAGAACAGCAGCGCAGCGGCTTCGTCAGAGTCGTTCGGGTCGACTCAGGTGTCGCCGATGTCGGACTTGACAGAGTATTATTACGGTGGACTTCCGGTTGGTAACAAGGGTAACCCTAATCCGGATTACTGTCAAACGGGGGAATTGAGCTACTCGGATAGCATCAGTAGCTTGGATATGCAAGCCGTGGAAGCAAACAGCAGCAACCCCCAGTATTGGGCTCAGAGTGCTGGAGGGGACACGTCGGACAATTTCTGGAATGATGAAAACATGCTGTTTTTACAGCAACAGCTCAGTGACAACATGTAA	924	0.5216	MDMDMDMDASEIRGGSSNLQNDDDLDLRRGPWTLDEDLTLIHYIAAHGEGRWNSLARSAGLKRTGKSCRLRWLNYLRPDVRRGNITLEEQFLILELHSRWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKQAKKLKCDVNSKQFKDTMRFLWMPRLAERIQASAATVSFSPTVSTITTATPPSAAHNYNNFEFLGASQFTGSNYATENSSAAASSESFGSTQVSPMSDLTEYYYGGLPVGNKGNPNPDYCQTGELSYSDSISSLDMQAVEANSSNPQYWAQSAGGDTSDNFWNDENMLFLQQQLSDNM	307

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele22g0597	307	CDD	SANT	86	125	IPR001005	-
	Lele22g0597	307	CDD	SANT	31	76	IPR001005	-
	Lele22g0597	307	Gene3D	-	29	81	-	-
	Lele22g0597	307	ProSiteProfiles	Myb-like domain profile.	24	76	IPR001005	-
	Lele22g0597	307	MobiDBLite	consensus disorder prediction	1	22	-	-
	Lele22g0597	307	Gene3D	-	85	148	-	-
	Lele22g0597	307	FunFam	Myb transcription factor	29	81	-	-
	Lele22g0597	307	SMART	sant	81	129	IPR001005	-
	Lele22g0597	307	SMART	sant	28	78	IPR001005	-
	Lele22g0597	307	PANTHER	MYB TRANSCRIPTION FACTOR-RELATED-RELATED	26	229	IPR044676	GO:0003700\|GO:0006355\|GO:0043565
	Lele22g0597	307	ProSiteProfiles	Myb-like domain profile.	77	127	IPR001005	-
	Lele22g0597	307	ProSiteProfiles	Myb-type HTH DNA-binding domain profile.	24	76	IPR017930	-
	Lele22g0597	307	Pfam	Myb-like DNA-binding domain	82	125	IPR001005	-
	Lele22g0597	307	Pfam	Myb-like DNA-binding domain	29	76	IPR001005	-
	Lele22g0597	307	FunFam	MYB transcription factor	86	149	-	-
	Lele22g0597	307	SUPERFAMILY	Homeodomain-like	26	123	IPR009057	-
	Lele22g0597	307	ProSiteProfiles	Myb-type HTH DNA-binding domain profile.	77	131	IPR017930	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele22g0597	Lele-ChrLele22	3919870	3921185	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele22g0597	13	303	MYB Transcription Factor Family	AT2G47190	48.973	3.49e-85	255

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	MYB	Lele22g0597		Myb_DNA-binding	6.2e-15	CL0123