Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0585 ATGGCAACAGCTGAGGCATCTGCTGCTTCTCTTGGTCCCCGATATGCACCTGATGACCCTACTCTTCCAAAACCTTGGAAGGGATTGATTGATGGAAGTACGGGTCTATTATACTATTGGAACCCTGAAACCAACATCACCCAGTATGAAAAACCTACAGCTCCGCCACCACCCATGCCTACTGGGCCACCTCCTGCAGTTTCTACACCCAAGTTGGCTCCCATACCAGTGGCTCATTCAGTGCAACCTGGTGGGGTGGTGGCACAGCATGGGCAGCAGTTACTACAAACCTCTCACCAACAGGGACAGCAAATGAGCCACCTATCTCAACAGCATAGTCCCCAGGTAGCACCGGTCGCTCAGCAGCAGCCTGCTCAAGCAGCACAAGCTGGACAACAACAGAGTTCACAGTCACTGCAATCTATGCCACAACCAGGTTTGCAACAAGTCAGGCAGCAGCAGATGTTGCAGCCTATGAGTCAGCAAATTCCACCACAGCACATGCATCATCAGATGCCACAACAAGCCATCCAGTCACAACCTTTTGGGCAAGGAGCCACCCAGGATCATGGTTCATATATGGGACAGCCAGAAGCTCATCAATTCAATCACCAGAACCTACATTACATGCCATATTCACAAAGCTTGCACTCAAATGGGCCGCAAAGTTCCCAGCCAATCCACCATAACATGCATGGTCAGCCATTGGAAAATCAACAGGAGTTTAAAGCAGCATTCCCAAAGGTAGAGGATGTAGATTTTAAAAATGGAAGTCAAGTTGGACTTTCACCATCCCAGTATCACCAAAAGAGTGCCTTGCCTTTGCAAGGCAATCAGAACATTCCTGTTGGAATTTCCCCTGTCCAGGTGCCACGTGTTGGTGTTAATGCTGGCCGAGCACAACCATTTGGCGGTATGCAACAGCCTTCTGCATTGCAGCAGGGTAGTGCTGATTTAGTTTATCAACATGGTCATAACTTTCAAAAACAGATGGGCCCAGGAATGATGCATGGTCAGCCATCTAATGTCCATCCTGCTGACCTAAAGATGGGACATGAGGATAACTTACGTGGTAGAGCTGTTAATGAATATTACTACAACTCTAGCAAGGAGATGTCACCAATGGGTTCTCAGCAGCCAAATATTGCACCAATACCCATTTCAAGAAATCAGCAGGCTTATCAGCAGGATATGAGGATTGGCAGTTCCCCTTTTCAAAATGCAATGCCTGGTGGGAATGGGTTAAATGGTGTCCCAGGGCATAGTATGCATAACATGTTTAATCCTCCGATTGGAGGCCCTCCACCAGTTGCTGGTAACTCTTTGACTAGGTCTCATGTCACTGATCTGTCACCTGCTGAAATTTACCGTCAGCAACATGAAGTTACAGCAACGCACACTGGGGGCGGCAATGTTCCTCCCCCCTTCATGACGTTTGATGCTGCTGGGTTTCCTCCAGAGATTTTGAGAGAGATCTATTCTGCGGGCTTCTCAACTCCAACACCTATTCAAGCTCAAACGTGGCCTGTTGCCCTACAGGGTAGGGACATAGTGGCTATTGCTAAAACAGGCTCTGGAAAAACATTGGGATATTTAATGCCAGCATTTATGATTCTTAGACAGAGGCGTAACAATCCCCTGAATGGCCCCACAGTGTTGGTATTGGCTCCAACACGTGAACTTGCAACACAGATTCAAGATGAAGCCTTAAAATTTGGTCGATCTTCACGGGTCTCCTGCACGTGCTTGTACGGTGGGGCACCAAAAGCTCTTCAGCTGAAAGAGTTAGACCGTGGAGCAGACATTGTTGTTGCTACACCTGGACGGCTCAATGACATACTTGAAATGAAGAAAATCGACTTTGGGCAAGTCTCACTTCTTGTGCTTGATGAGGCTGACCGAATGCTTGATATGGGTTTTGAGCCTCAAATCCGTAAGATTGTGAATGAGATACCGCCACGTAGGCAAACTCTTATGTACACAGCAACATGGCCAAAAGAAGTACGAAAAATTGCTGGTGATCTCCTCATTAATCCTGTCCAAGTTAATATCGGAAATGTTGACGAGCTTGCTGCAAATAAAGCTATCACACAGGTGTGTTTCAAGGATTATTTGTGTAAGAAGTATCATGTGATGAATAAATTACATATGTTGAGAAGATCTTTTGGGAATCTGCCTGACTCTTGTGCATTTGTCCCACAAATGGAGAAACAAAGGCGTTTAGAGCAGATCATCAGATCCCAAGAACGAGGTTCTAAGGTCATAATATTTTGCTCCACAAAGAGGTTATGTGATCAACTTACCCGTAGCATTGGCCGTAATTTTGGTGCAGCTGCAATCCATGGGGACAAGTCTCAAGGTGAAAGAGACTGGGTTTTGAATCAGTTTAGGACTGGGAAGTCGCCAGTTCTGGTTGCCACTGATGTTGCTGCCCGTGGGCTTGACATTAAGGATATAAGGGTCGTGATCAACTATGATTTCCCTACTGGAATTGAGGACTATGTACACCGTATTGGTCGAACAGGAAGGGCTGGAGCCACTGGAGTGTCATACACCTTCATCTCTGAGCAGGACTGGAAACATGCCGGTGACTTGATTAAAGTTTTGGAGGGTGCTAACCAGCTGGTGCCTCCAGAGTTACGACAGATGGCTTTGCGTGGGCCATCTAACTTTGGAAAGGATCGGGGTGGAGTGAGCCGTTTTGACTCCGGTGGTGGCCGTTGGGAGTCTGGTGGCCGCGGTGGCATGAGAGATGGTGGCTTTGGCGGTCGTGGGGGCATGAGGGATGGTGGTGGGTTTGGGGGTCGTGGTGGCATGAGGGATGGTCCAACTGTGCAAGGAGGAAGAGGTGATTTCTTTCCTGGTAGGGGCAACAGGGGTCGGGGAATGGGGGGCCCTCGAGGTGGTCATGTTGGCTGGGGTAGAGGTGAACGTGACTCTCATGATCGTAACAATATGGATGGGAGAGGACGCGGGCGTGGACGTGGACGTTTTGACAACAGAAGAGATGTTAGTTACAGGAATAGAGGCAGAAGTCGCAGTCGCAGCCCTGAAAGGGTTCGAACATGGGATTATAGCAGCAGAAGTTGCAGTAGAAGCAGAAGCCGAAGTAGAACTCGAAGCAGGAGTAGGAGCTGGAGTAGGGGTCGCAGTAGAAGTCGCAGCTGGTCTCGTGGCCGGAGTCCCAGTTACAGCCGTAGCATAAGCCGGAGTCGGAGTCCCAGTCGTAGCCATGGCCGCAGGAGTCGAAGTTACAGCCGCAGACGTAGTCAAAGCCGCAGCTACGTTAGACGTGATAGGCCAGATCAACATGTTTCTGATCAGAATGAGCAGGGAGCACAAGAAGCTGAAGCTTCTGAACCAAGAACATTCTCCATGTCTCCCAGGTCCCAGGGGAACTCACTTCCGGGAACTGAACACGTGGAGCAGCTACTGGTTGTTAGTAGTGTTGAGACAGTTAATGCAGGGGCTGTAGTTGACCCTTGCCTTCAATCAGCTCCTAATGTCTAG 3510 0.4889 MATAEASAASLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNITQYEKPTAPPPPMPTGPPPAVSTPKLAPIPVAHSVQPGGVVAQHGQQLLQTSHQQGQQMSHLSQQHSPQVAPVAQQQPAQAAQAGQQQSSQSLQSMPQPGLQQVRQQQMLQPMSQQIPPQHMHHQMPQQAIQSQPFGQGATQDHGSYMGQPEAHQFNHQNLHYMPYSQSLHSNGPQSSQPIHHNMHGQPLENQQEFKAAFPKVEDVDFKNGSQVGLSPSQYHQKSALPLQGNQNIPVGISPVQVPRVGVNAGRAQPFGGMQQPSALQQGSADLVYQHGHNFQKQMGPGMMHGQPSNVHPADLKMGHEDNLRGRAVNEYYYNSSKEMSPMGSQQPNIAPIPISRNQQAYQQDMRIGSSPFQNAMPGGNGLNGVPGHSMHNMFNPPIGGPPPVAGNSLTRSHVTDLSPAEIYRQQHEVTATHTGGGNVPPPFMTFDAAGFPPEILREIYSAGFSTPTPIQAQTWPVALQGRDIVAIAKTGSGKTLGYLMPAFMILRQRRNNPLNGPTVLVLAPTRELATQIQDEALKFGRSSRVSCTCLYGGAPKALQLKELDRGADIVVATPGRLNDILEMKKIDFGQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIAGDLLINPVQVNIGNVDELAANKAITQVCFKDYLCKKYHVMNKLHMLRRSFGNLPDSCAFVPQMEKQRRLEQIIRSQERGSKVIIFCSTKRLCDQLTRSIGRNFGAAAIHGDKSQGERDWVLNQFRTGKSPVLVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGVSYTFISEQDWKHAGDLIKVLEGANQLVPPELRQMALRGPSNFGKDRGGVSRFDSGGGRWESGGRGGMRDGGFGGRGGMRDGGGFGGRGGMRDGPTVQGGRGDFFPGRGNRGRGMGGPRGGHVGWGRGERDSHDRNNMDGRGRGRGRGRFDNRRDVSYRNRGRSRSRSPERVRTWDYSSRSCSRSRSRSRTRSRSRSWSRGRSRSRSWSRGRSPSYSRSISRSRSPSRSHGRRSRSYSRRRSQSRSYVRRDRPDQHVSDQNEQGAQEAEASEPRTFSMSPRSQGNSLPGTEHVEQLLVVSSVETVNAGAVVDPCLQSAPNV 1169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0585 1169 MobiDBLite consensus disorder prediction 972 1022 - -
Lele22g0585 1169 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 740 884 IPR001650 -
Lele22g0585 1169 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 508 682 IPR014001 -
Lele22g0585 1169 MobiDBLite consensus disorder prediction 886 1140 - -
Lele22g0585 1169 SUPERFAMILY WW domain 14 55 IPR036020 GO:0005515
Lele22g0585 1169 MobiDBLite consensus disorder prediction 1107 1138 - -
Lele22g0585 1169 MobiDBLite consensus disorder prediction 51 71 - -
Lele22g0585 1169 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 477 505 IPR014014 GO:0003724
Lele22g0585 1169 Pfam WW domain 22 52 IPR001202 GO:0005515
Lele22g0585 1169 MobiDBLite consensus disorder prediction 1033 1055 - -
Lele22g0585 1169 Gene3D - 451 689 IPR027417 -
Lele22g0585 1169 Pfam DEAD/DEAH box helicase 501 671 IPR011545 GO:0003676|GO:0005524
Lele22g0585 1169 FunFam ATP-dependent RNA helicase RhlB 720 887 - -
Lele22g0585 1169 MobiDBLite consensus disorder prediction 1073 1094 - -
Lele22g0585 1169 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 450 884 - -
Lele22g0585 1169 MobiDBLite consensus disorder prediction 1 28 - -
Lele22g0585 1169 Pfam Helicase conserved C-terminal domain 737 845 IPR001650 -
Lele22g0585 1169 MobiDBLite consensus disorder prediction 48 72 - -
Lele22g0585 1169 ProSiteProfiles WW/rsp5/WWP domain profile. 20 54 IPR001202 GO:0005515
Lele22g0585 1169 Gene3D - 16 55 - -
Lele22g0585 1169 MobiDBLite consensus disorder prediction 94 169 - -
Lele22g0585 1169 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 628 636 IPR000629 -
Lele22g0585 1169 SMART ultradead3 496 699 IPR014001 -
Lele22g0585 1169 CDD SF2_C_DEAD 731 854 - -
Lele22g0585 1169 ProSitePatterns WW/rsp5/WWP domain signature. 26 52 IPR001202 GO:0005515
Lele22g0585 1169 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 548 860 IPR027417 -
Lele22g0585 1169 SMART ww_5 21 54 IPR001202 GO:0005515
Lele22g0585 1169 MobiDBLite consensus disorder prediction 1056 1072 - -
Lele22g0585 1169 CDD WW 23 51 IPR001202 GO:0005515
Lele22g0585 1169 Gene3D - 712 886 IPR027417 -
Lele22g0585 1169 SMART helicmild6 761 845 IPR001650 -
Lele22g0585 1169 FunFam probable ATP-dependent RNA helicase DDX17 441 685 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0585 Lele-ChrLele22 3827753 3833707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0585 475 883 Eukaryotic Initiation Factors Gene Family AT3G19760 31.873 3.60e-62 216