Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0576 ATGCCTCTGTGGTTTTGTTCAGTTAATCTCTCAATTTTGCGCTTTAGCATTAATTCCAGATCTCACACATCACCTGTCTCGGATAAACGCATCGATGGAGAAAGGCTTTTTCAATTGTCAATGGTGACTCCAGCTTGTTCATTATCTGTCACCTTCTGGCTCACTTCACCATTGCTTATTTTTCTTCCTAGAATTTCATGTGCCCCTTGTTTGCTTTTCTTCACTTCCCTTAAGCTTCACAACAGGGTCCGTGTTCTGATTCAATTCAAGGACCCATTTGATGCTTTTGTGAAAACCCAGAAAGGTTTATTGCATCGGAAGGAAGAATATGACAATGGGGTTGAACTGGTTTTTCTTGCGACGCTCTGGTTCATAATTCATATATTTGGCATCAGCAAAATGGCATCTGGTCTGAATTCAGGGTTATCCAAGAAAACTTCTGTTTTTGGTTTAAAAGCTTGGGAACTGATGGCAATGGTTGTTGGGTTGTTCATTATAATCATTCTTGTGGTTCTATCAATATGTCTTACAAAGCGAAAGAAATCCAGAAAAATCAACAGCAGCATGCTTCCCTTTACCCATATATCATCGATTTCAGAAGAGATCAAAGAGATTAAAGTTGATCAAGTTTCTGCAAATAATCATCTGCAGAATGGTTCTTTTGTGAGTTTGACAGACAAATTTAGTGACAAGGAGTCTGCAAAGGCTTTAATCCAAATGAAGAATGGGGATAACCTCAACAGTAGTCAGTCAGGTTCATTTAATCATTTAGAGAAAGATGGTGTTGGCTCTCAATCAGGCGACGACAGCGGCTCCAAGACTAATTCTTCATACAGCCCCTTGTCTGGTTTGCCTGAATTTTCTCAACTAGGCTGGGGTCACTGGTTCACATTAAGGGACCTAGAACTTGCAACAAACAGGTTTTCAAGGGACAATGTGATTGGGGAAGGTGGTTATGGAATTGTTTATCACGGCCAACTAGTCAATGGGAATCCCGTGGCTGTTAAGAAGATCCTCAATAATGTAGGACAGGCCGAAAAGGAATTCAGGGTGGAAGTTGAGGCTATTGGTCATGTGCGACATAAGAACTTGGTTCGACTTCTCGGATACTGCATTGAAGGAACGCACAGGTTGTTGGTTTATGAGTATGTTAACAATGGCAATTTAGAACAATGGCTACATGGAGCAATGCAGAAGCATGGGTATCTTACTTGGGATGCTCGGATGAAAGTTGTCCTTGGGACGGCTAAGGGGCTGGCTTACTTGCATGAGGCAATTGAACCGAAGGTTGTACATCGTGATATTAAGTCAAGCAATATTCTGATCGATGATGAATTCAATGCCAAAATATCCGACTTTGGGCTAGCTAAGTTGCTGGGTTCTGGGAAAAGTCATATCACAACTCGAGTAATGGGTACTTTTGGATATGTGGCTCCAGAATATGCCAATTCTGGCTTACTAAATGAGAAGAGCGATGTTTATAGCTTTGGTGTGTTGCTACTTGAAGCCATTACTGGAAGAGACCCCGTGGATTACAGCCGACCAGCAGATGAGGTAAATTTGGTTGACTGGCTCAAGATGATGGTAGGGAATAGGCGTTCAGAAGAGGTGGTTGACCCAAAACTCGAGACTCGCCCATTGACAAGTGCCCTTAAACGAGTTCTTTTGACTTCACTGAGGTGTGTCGATCCAGATGCTGGAAAAAGGCCAAAGATGAGTCAAGTTGTCCGCATGCTCGAATCAGAAGAACACCCTATACCTCGAGAGGATAGAAGGCAGCAAAAGAGTCGGGCGGGAACCATGGAGACTTCCGATGCAGAAAAGAGTGAGAATCCAGAGAAGAGGTCAAATGAGAGAAGGAACCAGAGGAAATAG 1875 0.4272 MPLWFCSVNLSILRFSINSRSHTSPVSDKRIDGERLFQLSMVTPACSLSVTFWLTSPLLIFLPRISCAPCLLFFTSLKLHNRVRVLIQFKDPFDAFVKTQKGLLHRKEEYDNGVELVFLATLWFIIHIFGISKMASGLNSGLSKKTSVFGLKAWELMAMVVGLFIIIILVVLSICLTKRKKSRKINSSMLPFTHISSISEEIKEIKVDQVSANNHLQNGSFVSLTDKFSDKESAKALIQMKNGDNLNSSQSGSFNHLEKDGVGSQSGDDSGSKTNSSYSPLSGLPEFSQLGWGHWFTLRDLELATNRFSRDNVIGEGGYGIVYHGQLVNGNPVAVKKILNNVGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRLLVYEYVNNGNLEQWLHGAMQKHGYLTWDARMKVVLGTAKGLAYLHEAIEPKVVHRDIKSSNILIDDEFNAKISDFGLAKLLGSGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVLLLEAITGRDPVDYSRPADEVNLVDWLKMMVGNRRSEEVVDPKLETRPLTSALKRVLLTSLRCVDPDAGKRPKMSQVVRMLESEEHPIPREDRRQQKSRAGTMETSDAEKSENPEKRSNERRNQRK 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0576 624 MobiDBLite consensus disorder prediction 566 624 - -
Lele22g0576 624 Pfam Protein kinase domain 309 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g0576 624 Gene3D Transferase(Phosphotransferase) domain 1 384 597 - -
Lele22g0576 624 PANTHER OS01G0323000 PROTEIN 137 609 - -
Lele22g0576 624 SMART serkin_6 308 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g0576 624 Gene3D Phosphorylase Kinase; domain 1 287 383 - -
Lele22g0576 624 MobiDBLite consensus disorder prediction 575 624 - -
Lele22g0576 624 SUPERFAMILY Protein kinase-like (PK-like) 292 586 IPR011009 -
Lele22g0576 624 MobiDBLite consensus disorder prediction 243 279 - -
Lele22g0576 624 CDD STKc_IRAK 314 580 - -
Lele22g0576 624 FunFam Putative receptor-like serine/threonine-protein kinase 384 595 - -
Lele22g0576 624 ProSitePatterns Protein kinases ATP-binding region signature. 314 337 IPR017441 GO:0005524
Lele22g0576 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 430 442 IPR008271 GO:0004672|GO:0006468
Lele22g0576 624 ProSiteProfiles Protein kinase domain profile. 308 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g0576 624 FunFam Putative receptor-like protein kinase 290 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0576 Lele-ChrLele22 3748995 3753208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0576 150 582 Trihelix Transcription Factor Family AT1G70460 41.553 1.27e-95 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Lele22g0576 Pkinase 6.2e-48 CL0016