Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0569 ATGGTGATCGTGAAACTTGGGAACAAGAACAACCAGGAGAAGCAAGGACAGGGAATGCGACTTGGGAAATACGAGCTTGGTAGGACTCTAGGCGAAGGCAATTTCGGGAAGGTCAAATTAGCTAGGAATACCGATTCCGGCCAACCCTTCGCGGTTAAGATCCTTGAGAAGAGAAAGATCCTTGACCTCAATATAACCAATCAGATTAAGAGGGAAATAGCCACCTTGAAGCTCTTAAAGCATCCGAACGTGGTCAGATTACACGAGGTCTTGGCTAGCAAGACCAAGATTTATATGGTCCTAGAGTGCGTGACTGGAGGAGAATTGTTTGACAGAATTGCATCCAAAGGCAAACTTCCAGAAGCTGAAGGAAGGAAGCTTTTCCAGCAGTTGGTTGACGGTGTTAGCTACTGTCATGATAAAGGGGTCTTCCACAGAGATCTCAAGCTGGAGAATGTACTTATTGATGCCAAAGGGAACATAAAGATAACCGATTTTGGCCTAAGTGCTTTACCCCAGCATTTTAGAGCAGATGGTTTGCTGCATACCACCTGTGGAAGTCCCAACTATGTGGCCCCTGAGATTCTTTCTAATAAAGGATATGATGGCGCAACATCAGATACATGGTCCTGTGGGGTCATCTTGTATGTTATCTTAACAGGATATCTCCCTTTTGATGATAGGAATCTTGTAGTTCTCTACCAAAGGATTCTTAAGGGAGATGTTCAGATACCAAAATGGCTATCGCCTGGTGCCAAAAACATAATAAAGAGGATTCTTGATCCCAACCCTGCTACTCGGATCACAATGGCTGGCATCAAACAAGATGAATGGTTCAAGCAGGACTATATTCCAGCAAAGCCAGAGGATGAGGAAGAGGACGTATATATTGACGATGATGCCTTTTCCGAAATCCACGAAATGGCTCACGAAACAGAAGATAAGAGTCCAGGATCACCAACCCTTATCAATGCATTTCAATTGATAGGGATGTCTTCATGCCTTGACCTCTCTGGCTTCTTCGAAAAAGAGGATGTCTCAGAGAGGAAGATAAGATTTACGTCCAACCTCTCCGCAAAAGACTTGATCGAGAGGCTTGAGGACATTGTGACAGAAATGGGATATACAGTCCAAAAGAAAAATGGAAAAGTGAAAGTGATACAAGAGAACAAGGCATGTAAAAATTTAGGCAGCCTCACAGTTGCAGCAGAGGTTTTTGAGATAAGCCCATCCTTGTATGTAGTAGAGTTGAGGAAATCCTATGGAGATTCTTCTGTATATAGAAAGTTGTGCGAGAAGTTGTCAAATGATCTGGGGGTTCCTCCAAGAACCGGAGCACTCCATGTTCTTTCTGATCCAACAAGGGCTCCGTGTCAAATCTAA 1383 0.4367 MVIVKLGNKNNQEKQGQGMRLGKYELGRTLGEGNFGKVKLARNTDSGQPFAVKILEKRKILDLNITNQIKREIATLKLLKHPNVVRLHEVLASKTKIYMVLECVTGGELFDRIASKGKLPEAEGRKLFQQLVDGVSYCHDKGVFHRDLKLENVLIDAKGNIKITDFGLSALPQHFRADGLLHTTCGSPNYVAPEILSNKGYDGATSDTWSCGVILYVILTGYLPFDDRNLVVLYQRILKGDVQIPKWLSPGAKNIIKRILDPNPATRITMAGIKQDEWFKQDYIPAKPEDEEEDVYIDDDAFSEIHEMAHETEDKSPGSPTLINAFQLIGMSSCLDLSGFFEKEDVSERKIRFTSNLSAKDLIERLEDIVTEMGYTVQKKNGKVKVIQENKACKNLGSLTVAAEVFEISPSLYVVELRKSYGDSSVYRKLCEKLSNDLGVPPRTGALHVLSDPTRAPCQI 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0569 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672|GO:0006468
Lele22g0569 460 ProSiteProfiles NAF domain profile. 318 342 IPR018451 GO:0007165
Lele22g0569 460 FunFam Non-specific serine/threonine protein kinase 320 441 - -
Lele22g0569 460 Gene3D Kinase associated domain 1, KA1 325 440 - -
Lele22g0569 460 ProSiteProfiles Protein kinase domain profile. 24 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g0569 460 Pfam NAF domain 320 379 IPR004041 GO:0007165
Lele22g0569 460 Pfam Protein kinase domain 24 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g0569 460 SMART serkin_6 24 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g0569 460 CDD CIPK_C 324 435 - -
Lele22g0569 460 Gene3D Transferase(Phosphotransferase) domain 1 17 324 - -
Lele22g0569 460 FunFam Non-specific serine/threonine protein kinase 15 103 - -
Lele22g0569 460 FunFam Non-specific serine/threonine protein kinase 17 320 - -
Lele22g0569 460 SUPERFAMILY Protein kinase-like (PK-like) 21 306 IPR011009 -
Lele22g0569 460 ProSitePatterns Protein kinases ATP-binding region signature. 30 53 IPR017441 GO:0005524
Lele22g0569 460 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 13 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0569 Lele-ChrLele22 3705090 3710068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0569 87 439 CBL-interacting serine-threonine protein kinases AT3G17510 71.105 0.0 509
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele22g0569 Pkinase 3.8e-72 CL0016