Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0566 ATGACAAGAGAAACGAGTTTAGATGGAGATATTATCATTACACCCAAGACAAGAAGTTCAGCAAGTAATCCTGAAAAAGTTCAGGGAGAGTCCGAAAAGAATCAGGATTCAAAGAAGAAGATTAAGGAAAAAGATGAGACCACCATCAACACTGTACCTTTTTACAAGCTTTTCTCATTTGCAGATTCTATGGATTATCTGTTGATGCTTGTGGGGACAGTTGGTGCTGTTGCAAATGGAATGGCTATGCCGTTGATGATTCTATTTCTTGGAGATGTAATTGATGCTTTTGGAAGATCCGCAGACACCAAACAAGTTGTTCATGAAGTTTCCAAGGTGTTATTGAAGTTCGTGACTTGCTGGATGGTCCCTGGAGAAAGACAGGCTGCAAGAATAAGAGGTTTATACCTGAAGACAATTTTGAGACAGGACATCAGTTTCTTTGATAAGGAAACTAACACTGGCGAGGTTGTTGGAAGGATGTCAGGTGATACTGTTCTTATTCAAGATGCCATGGGAAAGAAGGACAGTTCAGTGTGTGTGGCAACTTCTTTTGGAGGTTTTATCATAGCATTTGTCGAGGGATGGCTTCTAACTCTTGACATGCTATCTTCTATTCCTCCTGTTGTCTTCTCTGATGCTATGATGAGCATTGTTCTCGCGAAAGCGACATCCCGTGGACAAAAAGCTTATTCTTCCGCTGCAAGTATAGTAGACCAGACTATTGGTTCTATCCGAATGGTTGCATCATTCACAGGGGAGAAGCAAGCTATAGCTAAATATGATCAGCTCTTGATTAAAGCTTACAGGACCAGTGTGCAAGAGGGACTGGCTTCTGGTTTGGGTTTTGGTTCAACTTTTCTTCTCTTTTTCTTCATTTATGGTTTAGCAGTTTGGTATGGTAGGAAAATGGTCCTCGAGAAAGGGTATACAGGAGGGAAGGTTATGACTGTAATTTTCTCAGTTGTGACAGGCTCCATGTCTCTGGGGCAGGCATCTCCAAGCATGAGTGTTTTTGTTGCAGGACAAGCTGCAGCCTCTAAGATGTTTGAAACGATAACGAGGAACATTAAAGAGAACATTGACTATGGCAAGGATGGTGCAACAGATGAAGAAATCAGAGCTGCAGCAGAGCTTGCTTATGCTGCAAAATTCATAGATAAACTTCCTAAGGACCCTGATGGAGCCTATAGCCAACTCATTAGATTGCAGGAAACAAAGGAGTCAGAGAATATTAATGAAATTGACACAGATAAGCCAGAAAGCATAACGAATTATGAAAGGCAATCAAGCCAAAGAATTTCTTCCTTAAAATCTGTAAGTCGAGAGTCATCTGGACTTGGAAGAAGCAGTCGTAATTCATTCTCAGTGCCATATGTTGTGTTTCCAACAAATGAACACTTTGAAACAGAAGGTGCAGAACCTAAAGCTCCTCATTCAAAAGATTCACCAACACCTCCAGAAGTGCCACTTTACCGCCTGGCTTATCTAAACAAACCTGAGGTTCCAGTTTTGTTTATAGGGACTCTAGTAGCTGTGGCAAATGCAGCAATATTCCCAGATTTCGGGTTACTGATCTCCAAAATGATAAACACTTTCTATGAACCTGCAGATAAACTCAGTAAAGATTCAAAGTTTTGGGCTTTGACATTTGTTGCCCTTGGTGTGGCATCCTTCTTAGTAATTCCAGCAAAGTTCTACTTTTTTGCTGTTGCTGGTGGTAATTTGATAAGAAGGATCCGGTTAATGTGTTTTGAGAAATTAATCCATATGGAAGTAAGTTGGTTTGATGAAGATGAGCATACAAGTGGAGTCCTTGGAGCCAGGCTATCTACTGATGCAGCTTCTGTCCGAGCTTTGGTTTGA 1866 0.4105 MTRETSLDGDIIITPKTRSSASNPEKVQGESEKNQDSKKKIKEKDETTINTVPFYKLFSFADSMDYLLMLVGTVGAVANGMAMPLMILFLGDVIDAFGRSADTKQVVHEVSKVLLKFVTCWMVPGERQAARIRGLYLKTILRQDISFFDKETNTGEVVGRMSGDTVLIQDAMGKKDSSVCVATSFGGFIIAFVEGWLLTLDMLSSIPPVVFSDAMMSIVLAKATSRGQKAYSSAASIVDQTIGSIRMVASFTGEKQAIAKYDQLLIKAYRTSVQEGLASGLGFGSTFLLFFFIYGLAVWYGRKMVLEKGYTGGKVMTVIFSVVTGSMSLGQASPSMSVFVAGQAAASKMFETITRNIKENIDYGKDGATDEEIRAAAELAYAAKFIDKLPKDPDGAYSQLIRLQETKESENINEIDTDKPESITNYERQSSQRISSLKSVSRESSGLGRSSRNSFSVPYVVFPTNEHFETEGAEPKAPHSKDSPTPPEVPLYRLAYLNKPEVPVLFIGTLVAVANAAIFPDFGLLISKMINTFYEPADKLSKDSKFWALTFVALGVASFLVIPAKFYFFAVAGGNLIRRIRLMCFEKLIHMEVSWFDEDEHTSGVLGARLSTDAASVRALV 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0566 621 SUPERFAMILY ABC transporter transmembrane region 56 353 IPR036640 GO:0005524|GO:0016020
Lele22g0566 621 MobiDBLite consensus disorder prediction 409 452 - -
Lele22g0566 621 Gene3D ABC transporter type 1, transmembrane domain 466 621 IPR036640 GO:0005524|GO:0016020
Lele22g0566 621 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 506 621 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele22g0566 621 MobiDBLite consensus disorder prediction 12 28 - -
Lele22g0566 621 Pfam ABC transporter transmembrane region 69 327 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele22g0566 621 Pfam ABC transporter transmembrane region 505 619 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele22g0566 621 PANTHER ABC TRANSPORTER B FAMILY 474 618 - -
Lele22g0566 621 MobiDBLite consensus disorder prediction 1 42 - -
Lele22g0566 621 Gene3D ABC transporter type 1, transmembrane domain 71 404 IPR036640 GO:0005524|GO:0016020
Lele22g0566 621 SUPERFAMILY ABC transporter transmembrane region 493 620 IPR036640 GO:0005524|GO:0016020
Lele22g0566 621 MobiDBLite consensus disorder prediction 424 452 - -
Lele22g0566 621 CDD ABC_6TM_Pgp_ABCB1_D1_like 69 349 - -
Lele22g0566 621 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 120 341 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele22g0566 621 MobiDBLite consensus disorder prediction 409 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0566 Lele-ChrLele22 3667814 3672123 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0566 391 621 Calmodulin-binding Proteins AT2G36910 24.895 2.39e-14 75.1