Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0565 ATGGAATTATACCATAGAAGATGTGAAGGGCCAATTAAATCAGGCATAAGGAGAGGGATAATTAGTGGAACTGGATTTGGTTTATCATTCTTCTTGCTGTTTTCTGTCTATGCATGCAGTTTCTATGCTGGAGCTCGACTCGTACATGATGGCAAATCATCATTCTCAGATGTTTTTCGCGTCTTCTTTGCTCTAATTGCAACAGCATTAGGAATCTCCCAATTTAGCTCCATGGCTCCTGATTCAAGTAAAGCAAAGAGTTCTGTTGGTTCTATATTTGCTATTCTTGATGGGAAATCAAAAGTGGTCCCCAGTGATGACTCTGGAATCACATTGGAATACTTAATGGGAGAAATTGAGTTTCGCCATATCAGTTTCAAGTATCCAACCAGACCTGATTTTAATGTATTCAGAGATCTTTCCTTGACCATTCGTTCAGGAAAGTTTGCAGCAGAAGAGAAGGGAAAGCATGAAACTGTGCTCAACAAAGGTGGTGCCTATGCTTCCTTAGTAGCATTGCACACAAGTTCTTCCATAAAGGAACTCAATTGA 552 0.3986 MELYHRRCEGPIKSGIRRGIISGTGFGLSFFLLFSVYACSFYAGARLVHDGKSSFSDVFRVFFALIATALGISQFSSMAPDSSKAKSSVGSIFAILDGKSKVVPSDDSGITLEYLMGEIEFRHISFKYPTRPDFNVFRDLSLTIRSGKFAAEEKGKHETVLNKGGAYASLVALHTSSSIKELN 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0565 183 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 84 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele22g0565 183 Gene3D ABC transporter type 1, transmembrane domain 2 108 IPR036640 GO:0005524|GO:0016020
Lele22g0565 183 Pfam ABC transporter transmembrane region 2 69 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele22g0565 183 SUPERFAMILY ABC transporter transmembrane region 2 97 IPR036640 GO:0005524|GO:0016020
Lele22g0565 183 Gene3D - 109 151 IPR027417 -
Lele22g0565 183 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 1 151 IPR039421 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0565 Lele-ChrLele22 3665171 3667464 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0565 1 151 Calmodulin-binding Proteins AT2G36910 39.474 5.38e-33 122