Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0552 ATGATGGAAGGTTCAGAGAAGATTAGTCATCTAACAATACTGCTGCTGATGATGATAAGCTTATGCATACCAGTTATTGCAGATGGCAAGCATGTAAGCATCAAGAACAGCTTAGGATCTGGGAAGAACATGACCCTGCATTGCCAATCCAAAGATAATGATCTTGGTGAACATAACATAGAAGATGGAGATGAATTTGGCTGGGATTTCAATGACAATGTGACTGGTACCACACTGTTTTTCTGTGATCTGGAGTTGGAAAGTGTTCATCAGTACCATTTTGATGCTTATGAATTTGGCAGAGACTTTGTCAGGTGTAACACCGGATGTGCATGGCTTATATCAGCTGAAGGTATCTATGGTTTAAATGGACAAACAGGGTACTGGGAATTCATATACAACTGGCCTACAAGTTGA 417 0.4029 MMEGSEKISHLTILLLMMISLCIPVIADGKHVSIKNSLGSGKNMTLHCQSKDNDLGEHNIEDGDEFGWDFNDNVTGTTLFFCDLELESVHQYHFDAYEFGRDFVRCNTGCAWLISAEGIYGLNGQTGYWEFIYNWPTS 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0552 138 Pfam Plant self-incompatibility protein S1 31 135 IPR010264 -
Lele22g0552 138 PANTHER - 27 123 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0552 Lele-ChrLele22 3578852 3579268 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0552 32 135 Carbohydrate Esterase AT3G16970 33.333 2.95e-10 53.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g0552 22 3578852 3579268 Lele23g1507 23 19538923 19539288 hybridization
Lele22g0552 22 3578852 3579268 Lele24g0539 24 3570483 3571519 hybridization