Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0549 ATGGAGGGAAAGCTTGACTCTGATGATGGCGTGAAGCCCGTGACAGAGCAAGGAGCCGGAGGAGAGAACGGCCAAGACGTGGTGGTTCCAGAATCTTCTCCTCTCACTGCGAATTCTGGCAAAAATGTTGACGGTGATGCTTGCAACGGAGAGGCTGTTGAAGAATCTGCTGGAGATTTATTGGAAAAGAAGCATCTCTCTGCAAACAGGTCAATGCCAGCATCTAGACCAACTCAGCTCACCATCTTCTTTAATGGGAACGTTTGTGTCTATGATGGAATTCCTGCAGAGAAGGTGCATGAGATAATACATATTGCTGCTTGTGCTGCTAAGTCTGCTGACATGAATAGTGGAATACAATCCTCCTTTACTTCACCCATTCCCACAAGGCCATCTTCTCCACAGGGAACCCCTAATAATGTGACTTCACCAAAACCTCTCGGTTTTACTGGGCAGAAGAGTTCCATTTGTGGGTTGCAAGAATTTCCAATTGCACGCAGACAGTCACTGCAGCGCTTTCTTGAGAAGCGACGAGATAGGTTGGGGAGCAGAGCCCCATATGCTTCTCCGGCAAGAACTAAAGTGTCTGAAAATACAGAGAACAGCTGCAGTGCTGATAATGCACCTGATCTGGTTTCCTTCAAACACTCAGAGGAGGAGATTCAACCTAGTATCACTGCCTCTTAA 687 0.4716 MEGKLDSDDGVKPVTEQGAGGENGQDVVVPESSPLTANSGKNVDGDACNGEAVEESAGDLLEKKHLSANRSMPASRPTQLTIFFNGNVCVYDGIPAEKVHEIIHIAACAAKSADMNSGIQSSFTSPIPTRPSSPQGTPNNVTSPKPLGFTGQKSSICGLQEFPIARRQSLQRFLEKRRDRLGSRAPYASPARTKVSENTENSCSADNAPDLVSFKHSEEEIQPSITAS 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0549 228 MobiDBLite consensus disorder prediction 181 228 - -
Lele22g0549 228 MobiDBLite consensus disorder prediction 192 208 - -
Lele22g0549 228 Pfam Jas motif 163 187 IPR018467 -
Lele22g0549 228 ProSiteProfiles Tify domain profile. 73 108 IPR010399 -
Lele22g0549 228 MobiDBLite consensus disorder prediction 1 50 - -
Lele22g0549 228 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 51 200 IPR040390 -
Lele22g0549 228 SMART tify_2 73 108 IPR010399 -
Lele22g0549 228 Pfam tify domain 75 107 IPR010399 -
Lele22g0549 228 MobiDBLite consensus disorder prediction 119 148 - -
Lele22g0549 228 MobiDBLite consensus disorder prediction 29 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0549 Lele-ChrLele22 3570639 3573305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0549 44 187 Tify Gene Family AT5G20900 44.667 2.40e-26 99.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Lele22g0549 tify 3.4e-15 No_clan