Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0544 ATGAATGGGCTCAACATATTAAAAGGAAGAATCTCAAGCTTAGCTCTTAACGCAAAAGCTAAAATCTTTTACTCGTGAGTGACATGCATAGTCACCGCCGACACTCGCAAATCAGACACAAACCTCAAAGCTCAGCGTTCTTTGTCTGCCTCCGCTACTGAGACTCCCACAGGACACAGAAACGGTACGGGGAACTTGGGCTCTGATCTGCGAACATGGCTGAGTGCGGCACTTGCACATCCACAGACATGCATGGAAGGGTTCGAAGGCATCAATAGCCTTATGGATAATATGGTGTCATCTCTTCTAAGCCAAATGATCTCATTGATCCAACAACTCCTAACTCAGGTTCACCATGTTCCGGATGAGTTCCCTACAACTACAACAAGTAAGGTAAAGTTTCCTTCATGGATAAAGTTTCCTTCATGGATCAAACCAAGGGACCAGAAGCTTCTACGATCAAGTGAGATTAATCCGGATGTTGTAGTAGCAGGAGATGGAACTGGGACTTTCACTAAAGTATCAGATGCAGTGGAAGCAGCTCCTGATTATAGCATGAAACGTTTTGTGGTTTACGTAAAGAGGGGTCTGTACAAAGAGAATGTGGATATCGATAAGAAGAAATGGAACATCATGATGATTGGTGATGGCATGGATGACACTGTTATCTCCGGTAATCGGAACTTCAACCAAGGCGTTAGAGCGAGAGGATTCATAGCACGGGACATTACCTTCCAGAACACGGCAGGTCCACATAATCACCAAGCAGTGGCACTGAGATCAGATTCTGACCTATCAGTGTTCTACCGCTGTGGCATCTATGGCTACCAAGACAGTCTCTTCACACACACAATGCGACAATTCTACAGAGAATGTCGAATAAAAGGCACAGTGGATTTCATCTTCGGAGATGCCACAGCAGTGTTCCAGAAGTGCCAGATTCTGGCCAGAAGAGGGCTTCCAGGTCAGAAAAACGTAATCACAGCCCAAGGAAGAAAAGACCCACATGAACCAACTGGATTCTCCGTCCAATTCTGCAAAATCTCTGCAGATTCCGACCTTCTTCATTATGTTGGATCCACCGACACATACCTGGGGAGGCCCTGGAAGGCATTTTCTCGAACAGTTTACATGCAAACCTACATGAACGACTTGGTGAATCCCCGAGGGTGGCTCGAATGGAACGGCGATGATTCTTCGGTGAAAACACTTTATTATGCGGAGTACATGAACGATGGTCCAGGGGCCGCTCTGGAGAAGCGAGTGAAATGGCCAGGGTTTCATGTGTTGAAGGAGGCGAAGGAGGCTTATCTCTTCACAGTGGCTCGTTTTCTTGATGGGAATCTATGGCTGCCTCGGACAGGGGTCATGTACACAGCTGGTTTAGGCGATTGA 1395 0.4674 MNGLNILKGRISSLALNAKAKIFYSXVTCIVTADTRKSDTNLKAQRSLSASATETPTGHRNGTGNLGSDLRTWLSAALAHPQTCMEGFEGINSLMDNMVSSLLSQMISLIQQLLTQVHHVPDEFPTTTTSKVKFPSWIKFPSWIKPRDQKLLRSSEINPDVVVAGDGTGTFTKVSDAVEAAPDYSMKRFVVYVKRGLYKENVDIDKKKWNIMMIGDGMDDTVISGNRNFNQGVRARGFIARDITFQNTAGPHNHQAVALRSDSDLSVFYRCGIYGYQDSLFTHTMRQFYRECRIKGTVDFIFGDATAVFQKCQILARRGLPGQKNVITAQGRKDPHEPTGFSVQFCKISADSDLLHYVGSTDTYLGRPWKAFSRTVYMQTYMNDLVNPRGWLEWNGDDSSVKTLYYAEYMNDGPGAALEKRVKWPGFHVLKEAKEAYLFTVARFLDGNLWLPRTGVMYTAGLGD 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0544 464 Gene3D - 154 462 IPR012334 -
Lele22g0544 464 PANTHER PECTINESTERASE 55 452 - -
Lele22g0544 464 ProSitePatterns Pectinesterase signature 2. 294 303 IPR033131 -
Lele22g0544 464 MobiDBLite consensus disorder prediction 42 66 - -
Lele22g0544 464 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 67 106 IPR035513 -
Lele22g0544 464 Pfam Plant invertase/pectin methylesterase inhibitor 48 108 IPR006501 GO:0004857
Lele22g0544 464 Pfam Pectinesterase 160 448 IPR000070 GO:0030599|GO:0042545
Lele22g0544 464 FunFam Pectinesterase 154 462 - -
Lele22g0544 464 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 117 IPR035513 -
Lele22g0544 464 SUPERFAMILY Pectin lyase-like 157 461 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0544 Lele-ChrLele22 3514311 3517049 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0544 19 462 Carbohydrate Esterase AT3G43270 57.143 0.0 545