Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0538 ATGGGGATAGAAAGAGAGGGGTCGAAGCAGCAACAGCAACAGGTGGGATACGCGGAGCAGCTTGTCGCCGTTAATCGCTATAATCCTGACATCCTTCCCGATCTCGAAAACCATGTTAACGAGCAGGTTTCATCACAAACATACAGCTTGGATGCGAATCTATGCCTTCTTCGCCTTTATCAGTTTGACCCAGACAGAATGAGTTCTCAGATTGTAGCCCGCATATTGGTTAAGGCCCTCATGGCAATGCCAGCTCCAGATTTCAGCCTTTGTCTCTTTCTGATTCCAGAACGTGTGCAAATGGAGGAGCAATTCAAGACACTGATTGTTTTATCACACTATTTGGAGACTGGAAGATTTCGCCAATTTTGGGATGAAGCAGCAAAGAGTCGTCATATAGTTGAAGCTGTGCCAGGTTTTGAGCAAGCAATTCAAGGTTATTCGATTCATGTCCTCTCGTTAACATACCAAAAAGTTCCTAGATCTGTGCTGGCTGAGGCCATCAACATAGAAGGCTTGGCCTTAGACAAATTCCTTGAACACCAAGTAGCCAACAGTGGTTGGGTTATTGAGAAAGGCCATGGCAAGGGTCAACTCATTGTCTTACCGAGAAATGAATTCAATGACCCAGCGTCGAAGAAAAACGCTGCAGACAGTGTGCCATTGGAGCAAATTACACGCATTTTCCCTATTCTGAGTTGA 702 0.453 MGIEREGSKQQQQQVGYAEQLVAVNRYNPDILPDLENHVNEQVSSQTYSLDANLCLLRLYQFDPDRMSSQIVARILVKALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLETGRFRQFWDEAAKSRHIVEAVPGFEQAIQGYSIHVLSLTYQKVPRSVLAEAINIEGLALDKFLEHQVANSGWVIEKGHGKGQLIVLPRNEFNDPASKKNAADSVPLEQITRIFPILS 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0538 233 SUPERFAMILY ARM repeat 11 135 IPR016024 -
Lele22g0538 233 FunFam Eukaryotic translation initiation factor 3 subunit K 10 126 - -
Lele22g0538 233 ProSiteProfiles PCI domain profile. 48 207 IPR000717 -
Lele22g0538 233 Gene3D ARM repeat; domain 1 8 126 IPR016020 GO:0003743|GO:0005852|GO:0006446|GO:0043022
Lele22g0538 233 FunFam Eukaryotic translation initiation factor 3 subunit K 129 232 - -
Lele22g0538 233 Pfam CSN8/PSMD8/EIF3K family 68 192 IPR033464 -
Lele22g0538 233 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11 9 230 IPR009374 GO:0003743|GO:0005737|GO:0005852
Lele22g0538 233 SUPERFAMILY "Winged helix" DNA-binding domain 138 230 IPR036390 -
Lele22g0538 233 Gene3D - 129 232 IPR036388 -
Lele22g0538 233 Hamap Eukaryotic translation initiation factor 3 subunit K [EIF3K]. 9 233 IPR009374 GO:0003743|GO:0005737|GO:0005852
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0538 Lele-ChrLele22 3467118 3469647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0538 1 232 Eukaryotic Initiation Factors Gene Family AT4G33250 72.414 3.49e-123 347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g0538 22 3467118 3469647 Lele22g0538 22 3467118 3469647 ECH
Lele22g0538 22 3467118 3469647 Lele23g1525 23 19675538 19678013 hybridization
Lele22g0538 22 3467118 3469647 Lele24g0524 24 3460696 3463215 hybridization