Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0530 ATGCCTTTCCCTCTCCTCCTCCTCCCCTTCCTACTCCTCTCTCCACCCCTCTCCCACTCCGCCGCCCCTCCCCCTCCTCCACCCTCCTCCGATCTCCTCCTATCCTCATGCGTCCACGCCAGGTACCCCCATCTCTGCCTCCGTACTCTCTCCTCCTACGCCCACCCCTCCATCACCCCCAAGGACCTCGCTAAGGCCGCCCTCAACGTCAGCCTCGGTCACGCTCGCCACATCTCCCGCTTCCTCCACTCCCATCTTCCCCCCTCCCCCTCCAAGCCATCGCACCGCCGCCGCCAATCCGCTCTCCATGACTGTGCCGAGCAGTTATCCGACTCTGTCGACCAGCTCAGCAGGAGCCTGGGAGAGCTGAATCACCTCCGCAAGTCGACGTTTCAGCTGCAGGTGAGCAACGCCCAGACCTGGGTGAGCGCCGCCATGACCGACGACGACACCTGCCTCGACGGTCTGAGCCCCGTCCACGACCGTGTGGTCAGGAAGATAAAGCGCAAGATCAACCGGGTGGCCAGGGTCACGAGCAACGCCCTCTACATGATCAACCGCCTCTGCGGCGGCCGTCCGATGCAAAAGTCCGAACCCTACGATTAA 606 0.637 MPFPLLLLPFLLLSPPLSHSAAPPPPPPSSDLLLSSCVHARYPHLCLRTLSSYAHPSITPKDLAKAALNVSLGHARHISRFLHSHLPPSPSKPSHRRRQSALHDCAEQLSDSVDQLSRSLGELNHLRKSTFQLQVSNAQTWVSAAMTDDDTCLDGLSPVHDRVVRKIKRKINRVARVTSNALYMINRLCGGRPMQKSEPYD 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0530 201 TIGRFAM PME_inhib: pectinesterase inhibitor domain 1 188 IPR006501 GO:0004857
Lele22g0530 201 SMART PMEI_2 28 184 IPR006501 GO:0004857
Lele22g0530 201 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 188 IPR035513 -
Lele22g0530 201 CDD PMEI-like_3 37 188 - -
Lele22g0530 201 Pfam Plant invertase/pectin methylesterase inhibitor 34 183 IPR006501 GO:0004857
Lele22g0530 201 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 189 IPR035513 -
Lele22g0530 201 PANTHER PECTINESTERASE INHIBITOR-LIKE 5 183 - -
Lele22g0530 201 MobiDBLite consensus disorder prediction 83 102 - -
Lele22g0530 201 FunFam Pectinesterase inhibitor 3 29 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0530 Lele-ChrLele22 3385320 3385925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0530 27 188 Carbohydrate Esterase AT3G14310 29.480 1.52e-17 78.2