Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0526 ATGGCTCTTTTGACCATAAAAAGTGAAAGAAGAGAGAAGGATGGGGCCAAAAAATGCGCGAATTCAAATGAAGCGGTTATGGAAAAGAAGATTAAGAAGGAGGCTGTGAACAATGAAAGCAAAGACGGCACTATTTTTGCCTCTTGCTCTTTCTCAAGCCTGGGACTGCATCCTACCTTATGCGACGAGCTCCGTGGAAGAATGGTTTTTGAAGTTCCAACCTCTGTACAAGCCCAAGCCATTCCTGTTATTCTCTCAGGGCGTCATGTTCTTGTTAATGCTGCCACGGGCACTGGGAAGACTGTTGCATACTTGGCTCCAATTATTCATCATTTGCAGAACTTTGATGGTAGAATCCAACGGTCTGATGGAACATATGCGTTGGTTCTTGTGCCAACACGAGAGCTATGTTTACAGGTTTATGAAATTCTTCAAAAGTTATTGCATCGATTTCACTGGATTGTACCTGGATACGTAATGGGTGGTGAAAGTAGGTCAAAAGAAAAGGCCAGGTTGCGCAAAGGCATATCGATTCTTGTAGCAACTCCTGGGCGCCTTTTAGATCACTTGAAGAATACATCATCATTCTTGTACGCCAATTTGCGTTGGATAATCTTTGATGAAGCTGATAGGATTTTGGAATTAGGATTCGGAAAAGAAATAAAGGAAATACTAGATCATTTGGATACAAAAACAGGCTGTGCTAACCAAGAGAATGCAGTTTCAAGGCACTCTGGAGCTCTGAGACAGAATCTGCTCTTATCAGCTACTTTAAATGAAAAAGTGAATCATCTTGCTAGAATTAGTCTAGAGAATCCTGTGATGATTGGTCTTGATGGCAAAGGGATAGAACCAATTTCAATGAATGAGAGTCTTGGTTCTTCAGAATCTGATGAGGAGAGTGAAGACAATGAAGAGAATTATCCCAGTAACATGCTGCATACACCTGCTGGAGATTATAAAGTTCCCACACAATTGATTCAGAGATACGTTAAAGTACCTTGCGGCGCACGTCTTGCTGTTCTTCTCTCAATTTTGAAGTATCTTTCTGAAAGGGAAGCTTCACAAAAGATTGTGGTATTCTTTTCAACATGTGATGCAGTAGACTTTCACTTTTCACTGTTAAGTGAATTCCAGATTTCTTATCCACAATCAGAAGCAGATGCTAGACGGATGTTTCTGGGGTGCAAAGTGTTTCGTTTGCATGGAAACATGGATCAGGAGCACAGGAGGAAAACTTTTCAGATGTTTAAAAAAGATAAATCAGCTCTACTGTTTTCCACTGATGTAGCTGCTAGAGGACTGGATTTTCCGAAAGTCAGATGCATTATACAATATGATTCCCCAGGGGAAGCCACTGAATATGTGCATAGAGTTGGTAGAACTGCTCGGCTGGGTGAAAGAGGAGAGTCATTGTTATTTCTGCAGCCAGTTGAAATAGATTATTTACAGGACTTGGAAAAACATGGTGCATCATTAACAGAGTATCCTCTCCTCAAAGTGTTGGATAGTTTCCCACTATATGGTCAAAAGAAGCACATCAAGAATTTTGTTGCCATAGAGTCACATCCCTGTGTCATTTGTCTTCAGAAGGCTCTTGAATCCTTCATCATGTCTAAGCCCAAAATTGATAAACTTGCCAAGAGGGGATTTTGCTCTTGGGTCCGTGCCTACACAACCCATCGTGGTGAGTTGAAAAAGATATTTATGATCAAGAAACTCCACTTGGGGCATGTAGCGAAAAGCTTTGCACTTAAACAACAACCTTCCTTAGTTGCAAAGTCATACCAGAAGCAAACCAAGAGGAAGAGGATTCAGAAGCAAAGCGGGCTGGCTAAACAGAGAAAGATCACCAGTGTGACATAA 1866 0.4121 MALLTIKSERREKDGAKKCANSNEAVMEKKIKKEAVNNESKDGTIFASCSFSSLGLHPTLCDELRGRMVFEVPTSVQAQAIPVILSGRHVLVNAATGTGKTVAYLAPIIHHLQNFDGRIQRSDGTYALVLVPTRELCLQVYEILQKLLHRFHWIVPGYVMGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYANLRWIIFDEADRILELGFGKEIKEILDHLDTKTGCANQENAVSRHSGALRQNLLLSATLNEKVNHLARISLENPVMIGLDGKGIEPISMNESLGSSESDEESEDNEENYPSNMLHTPAGDYKVPTQLIQRYVKVPCGARLAVLLSILKYLSEREASQKIVVFFSTCDAVDFHFSLLSEFQISYPQSEADARRMFLGCKVFRLHGNMDQEHRRKTFQMFKKDKSALLFSTDVAARGLDFPKVRCIIQYDSPGEATEYVHRVGRTARLGERGESLLFLQPVEIDYLQDLEKHGASLTEYPLLKVLDSFPLYGQKKHIKNFVAIESHPCVICLQKALESFIMSKPKIDKLAKRGFCSWVRAYTTHRGELKKIFMIKKLHLGHVAKSFALKQQPSLVAKSYQKQTKRKRIQKQSGLAKQRKITSVT 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0526 621 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 341 513 IPR001650 -
Lele22g0526 621 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 205 213 IPR000629 -
Lele22g0526 621 SMART helicmild6 384 466 IPR001650 -
Lele22g0526 621 CDD SF2_C_DEAD 326 475 - -
Lele22g0526 621 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 81 276 IPR014001 -
Lele22g0526 621 PANTHER RNA HELICASE 25 549 - -
Lele22g0526 621 Gene3D - 9 279 IPR027417 -
Lele22g0526 621 SMART DUF4217_3 528 593 IPR025313 -
Lele22g0526 621 Pfam Domain of unknown function (DUF4217) 530 590 IPR025313 -
Lele22g0526 621 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 49 78 IPR014014 GO:0003724
Lele22g0526 621 Gene3D - 336 618 IPR027417 -
Lele22g0526 621 CDD DEADc_DDX31 60 277 - -
Lele22g0526 621 Pfam DEAD/DEAH box helicase 74 264 IPR011545 GO:0003676|GO:0005524
Lele22g0526 621 SMART ultradead3 69 286 IPR014001 -
Lele22g0526 621 Pfam Helicase conserved C-terminal domain 344 466 IPR001650 -
Lele22g0526 621 MobiDBLite consensus disorder prediction 288 316 - -
Lele22g0526 621 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 123 487 IPR027417 -
Lele22g0526 621 FunFam RNA helicase 8 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0526 Lele-ChrLele22 3353635 3357913 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0526 39 498 Eukaryotic Initiation Factors Gene Family AT3G19760 25.647 4.20e-31 124