Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0525 ATGAAGGCTTTACCGAATGGATACTTGCCTAATTCTGGCGAAGGAGAAAGAAAAACAATCAACTCAGAGTTATGGCATGCATGTGCTGGACCCTTGGTTTCCTTACCTCCTGTTGGAAGTCTTGTCGTTTATTTCCCCCAAGGACACAGCGAGCAAGTTGCAGCATCCATGCAAAAGGAGGCTGATTTCATACCCAGTTATCCTAACCTTCCATCCAAGTTGATTTGCATGCTTCACAATGTTGCACTGCATGCTGATCCAGAAACTGATGAGGTCTATGCACAGATGACCCTTCAACCTGTAAACAAATATGACAAAGAAGCAATACTGGCATCAGACATGGGTCTGAAGCAAAGCCGACAGCCTGCTGAATTCTTCTGCAAAACTCTTACAGCTAGTGACACAAGCACTCATGGTGGATTTTCTGTACCTCGTAGAGCAGCAGAGAAAATATTTCCACCTCTGGATTTTTCAATGCAACCTCCTGCTCAGGAGATTATTGCCAAGGATTTGCATGACAGTACATGGACATTCAGACATATTTATCGCGGACAACCCAAGAGACATCTGCTGACTACTGGTTGGAGTGTCTTTGTCAGCACAAAAAGACTATTTGCTGGAGATTCTGTTCTTTTTATTAGAGATGGAAAACAGCAGCTTCTTGTGGGTACTAGGCGTGCTAATAGACAGCAGTCTGCTCTCTCTTCATCAGTCATATCCAGTGACAGCATGCATATAGGCATTCTTGCTGCTGCAGCTCATGCTGCTGCAAATAACAGCCCATTTACCATATTTTACAATCCGAGGGCTAGCCCTGCTGAATTCGTAATTCCATTGGCCAAGTATAATAAAGCCATGTACACCCAAGTTTCCCTTGGAATGAGGTTTAGAATGATGTTTGAGACTGAGGAGTCAGGAGTTCGTCGATACATGGGTACAATCTCAGGGATCAGTGACTTGGATCCTGTGCGGTGGAAAAATTCACAGTGGCGCAATCTTCAGGTTGGATGGGATGAATCAACAGCTGGCGAGCGCCCAAACAGAGTATCAATTTGGGACATTGAACCGGTAGTAACTCCTTTCTACATTTGCCCGCCTCCTTTCTTCAGGCCCAGGTTCTCCAAGCAACCAGGAATGCCAGATGATGAGTTTGACATGGAAAATGCATTCAAGAGAGCTATGCCCTGGCTTGGAGATGAATTTGTCATGAAAGATGCCTCAAGTTCAATGTTTCCTGGTTTGAGTTTAGTTCAGTGGATGAGCATGCAGCAGAATACCCAGTTATCTGCTGCACAATCAGGAATGTTCCCATCTATGCTTTCATCCAATTCCCTTCATAATAACCTCAGCACTGATGATCCATCCAAATTATTGAGTTTCCAAAACCCTGTCCTCTCTGCATCAAATCTTCAATTTAACAGACCAAATTTACCAAACCAAGTCAATCAATTGCAACAAGCCCCAACATCATGGCCTCAGCAGCCGCAGCAGCAGCAGCAACAACAGCAGATGCAGTCCTTGATGCAAGCACCTGCAAACCAGCTCCAGCAGCAGAGGCAGCAGCCGCAGCCGCAGCCGCAGCAGCTTCCTGAGCCGCAAAATCTGACACAGCAGCAACAGCCCCAATCGCAGCAACAGCGAGTACAACAACCCCAGCAGCAGCAGCAGCCATGCCAACAGGCCATTATAAACAATGGGGTGATCGGTTCTAGTCAGATTCCAAATCAGAGTGTGCAACAATCAATAGCGTACTCTCAGCTTCAGCAGCAGCAGTTACTCTCAGCCAGCATGCCACTTCAACAAAATATTCAATCAGCTAGCAAAAATACATTCCCTCTTACAACCTTACCGCAAGATTCACAGTTTCAGCCACAGATAGACCAGCAAGCTACTCGCTTGCAGAGGCAACAGCAGCAATCCCAATTGCAGTTATTGCAACAAAGCTTGTCACAGAGGGCCCCACAACAACCACAAGTGGCTCAACTGCCACAACAAAACTTGTCAGAACAACAGTTGCAGTTACAGTTGCTACAAAAGTTGCAGCAGCAGCAGCAGCAGCAATTTCTTTCTCCAACTAGTTCAATTTTGCAGCCGCAACTACTACAGCAACAGCAAGCACACCTACAAAACCAACAACTACCACAACCGCCTCTATCTCAGCATCAGCCTCAGCAGCTCAGCAACAATGCGTTGTCTGCAGAGAAGCTTCTGGTCAGCAACGGCTTTTCTTCTTCACCTTTGATGCAACCACAACAGCTTCCTTTGAACCAAGCCCATAATATACCGAAACCACTTACAACTACCAGAGCTCCTTCTAATCTTACAGATGGAGATGCCCCATCATGTTCAACCTCGCCATCAACTAATAACTGCCAGGTATCTCCACCAAACCTCCTGAAGAGAAATCAACAAGTGCCGGCAACATTAGGGGGGAGCTTGGTAGTTGAGCCCTCTAATAATCTGGTACAGGAGCTGCAGGGGAAGTCTGACATCCAGATCAAACATGAGTTGCCAGGTGTAAAAGGGCCTGACCAACTAAAGTATAAAGGGACAATAACTGATCAATTGGAAGCCTCTTCTTCTGGAACATCTTACTGTCTGGATCCTTGCAGTGTGCAGCCAAATTTCCCCCTGCCCAATTTCTGCATGGATGGGGATGTCCAATCGCATCCTAGGAACAATCTTCCATTTGCATCTAATCTTGATGGACTAACGCCTGATACTTTGCTATCAAGAGGGTATGACTCGCAAAAAGATCTTCAAAATTTGCTCTCTAACTATGGTGGTGCTCCAAGAGATATAGAAACTGAGCTGTCAACTGCTGCTATCAGCTCACAGTCATTTGGTGTGCCAAGCATGCCCTTTAAGCCTGGCTGCTCAAATGATGTTGCCATCAATGATACTGGGGTTTTGAATAATAGCTTGTGGGCTAACCAGACTCAACGAATGCGAACATATACTAAGGTTCAAAAACGTGGCTCTGTTGGAAGGTGCATTGATGTCACTCGTTACAAGGGATATGATGAACTCAGACATGACCTGGCTCGCATGTTTGGGATTGAGGGGCAACTGGAAGATCCTCAAAGGACTGACTGGAAACTAGTATATGTAGATAATGAAAATGACATTCTTCTTGTTGGGGATGACCCTTGGGAAGAATTTGTTAGCTGTGTTCAGAGCATAAAGATACTGTCATCTGCTGAAGTACAGCAAATGAGCTTAGACGGGGATTTGGGTAATGTTCCAATCTCCAACCAAGCTTGTAGTGGGACAGATAGTGGTAATGCATGGAGGGGACAATACGATGATAACTCAGCCGCCTCATTTAATCGATAA 3336 0.4562 MKALPNGYLPNSGEGERKTINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKEADFIPSYPNLPSKLICMLHNVALHADPETDEVYAQMTLQPVNKYDKEAILASDMGLKQSRQPAEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIIAKDLHDSTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDGKQQLLVGTRRANRQQSALSSSVISSDSMHIGILAAAAHAAANNSPFTIFYNPRASPAEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTISGISDLDPVRWKNSQWRNLQVGWDESTAGERPNRVSIWDIEPVVTPFYICPPPFFRPRFSKQPGMPDDEFDMENAFKRAMPWLGDEFVMKDASSSMFPGLSLVQWMSMQQNTQLSAAQSGMFPSMLSSNSLHNNLSTDDPSKLLSFQNPVLSASNLQFNRPNLPNQVNQLQQAPTSWPQQPQQQQQQQQMQSLMQAPANQLQQQRQQPQPQPQQLPEPQNLTQQQQPQSQQQRVQQPQQQQQPCQQAIINNGVIGSSQIPNQSVQQSIAYSQLQQQQLLSASMPLQQNIQSASKNTFPLTTLPQDSQFQPQIDQQATRLQRQQQQSQLQLLQQSLSQRAPQQPQVAQLPQQNLSEQQLQLQLLQKLQQQQQQQFLSPTSSILQPQLLQQQQAHLQNQQLPQPPLSQHQPQQLSNNALSAEKLLVSNGFSSSPLMQPQQLPLNQAHNIPKPLTTTRAPSNLTDGDAPSCSTSPSTNNCQVSPPNLLKRNQQVPATLGGSLVVEPSNNLVQELQGKSDIQIKHELPGVKGPDQLKYKGTITDQLEASSSGTSYCLDPCSVQPNFPLPNFCMDGDVQSHPRNNLPFASNLDGLTPDTLLSRGYDSQKDLQNLLSNYGGAPRDIETELSTAAISSQSFGVPSMPFKPGCSNDVAINDTGVLNNSLWANQTQRMRTYTKVQKRGSVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDWKLVYVDNENDILLVGDDPWEEFVSCVQSIKILSSAEVQQMSLDGDLGNVPISNQACSGTDSGNAWRGQYDDNSAASFNR 1111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0525 1111 MobiDBLite consensus disorder prediction 483 556 - -
Lele22g0525 1111 Gene3D - 289 360 - -
Lele22g0525 1111 ProSiteProfiles B3 DNA-binding domain profile. 126 228 IPR003340 GO:0003677
Lele22g0525 1111 CDD B3_DNA 125 217 IPR003340 GO:0003677
Lele22g0525 1111 Coils Coil 667 687 - -
Lele22g0525 1111 Pfam AUX/IAA family 979 1070 IPR033389 -
Lele22g0525 1111 Pfam B3 DNA binding domain 126 227 IPR003340 GO:0003677
Lele22g0525 1111 SUPERFAMILY DNA-binding pseudobarrel domain 116 255 IPR015300 -
Lele22g0525 1111 FunFam Auxin response factor 289 361 - -
Lele22g0525 1111 ProSiteProfiles PB1 domain profile. 984 1077 IPR000270 GO:0005515
Lele22g0525 1111 SMART B3_2 126 228 IPR003340 GO:0003677
Lele22g0525 1111 FunFam Auxin response factor 124 228 - -
Lele22g0525 1111 SUPERFAMILY CAD & PB1 domains 997 1062 - -
Lele22g0525 1111 Gene3D - 979 1073 - -
Lele22g0525 1111 Gene3D - 124 227 IPR015300 -
Lele22g0525 1111 Pfam Auxin response factor 252 334 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lele22g0525 1111 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 17 1073 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lele22g0525 1111 MobiDBLite consensus disorder prediction 758 796 - -
Lele22g0525 1111 FunFam Auxin response factor 979 1073 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0525 Lele-ChrLele22 3331572 3338574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0525 1 487 B3 DNA Binding Superfamily AT1G19220 81.930 0.0 833
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lele22g0525 AUX_IAA 9.3e-10 CL0072