Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0516 ATGGCCGCTGTTCGACCCCGCATTTTCTTCTTCTTCTTCTTCCTCCTCCTCCTCACCCTTCCTTCTTTCTCTTCTTCTTCCGACACCGATGCCCTCCTCAAGCTCAAGCAGTCCTTCACCAATGCTGCTTCTCTTTCTTCCTGGGTCCCTAATTCTCCCCCCTGCCGATGGGCCGGAATCATGTGCGACAACAACATCATCATCGGTCTTCACCTTTCCGACATGGGTCTTTCCGGCAAGGTTGACATTGACTCTATGTTGGAGATTAAACGCCTTCGAACCGTCAGCTTGGTGAACAATTCTTTCTCGGGTCCTATCCCAGAGTTCAACAGAATCGGCGCTCTCAAGGCTTTATACCTGTCCACCAACCAATTTTCCGGGGAGATTTCCTCGGATTTCTTCTCCTCTTTGAACTCGTTGAAGAAAATCTGGCTTAATGGGAACAAATTCTCGGGAACCATCCCCGATTCCATATCCCAGCTGGACAATCTCATAGAGATTCACCTCGAGAACAATGAATTCTCCGGACCCATCCCGCATCTAAAGCAGAGCATCAAATCGCTGGACATGTCCAACAACAAACTTGAAGGTACAATCCCAGATAGCTTAACAAAATTTGGGGCTAATTCCTTCCAGGGAAACGAGGAGCTATGCGGGAAACCTCTAGACAAGGCGTGCGCCCAGAAGGTTACTGAAAGTAAGAATTCTTCCGGCAACGTCATGTTGATCATTCTCTTCATCGTCTGCTTGATCATCGCAGTCGCGCTGTTCATTGCGGTTAAGTCAAGGCGCCGTCTAGACAGCGACTTCAGCATGCTGAACAGAGACAGCGTGGACGAGGTGCAACTGAACGTGCCGAGCTCATCCGAAAGCAGAGATTCGGAATCGAGCAGGAGAGGGACGGGTTCGAAGAGGGGTGCGGCGAAGAGCGGGAGTACGGATCTGGTGGTGGTGAATGAGGAGAAGGGCGTGTTTGGGTTGCCGGATTTGATGAAGGCGGCCGCGGAGGTCCTCGGAAACGGAGGTTTGGGATCGGCATATAAGGCGGGTATGACGACTGGATTGAGCGTGGTGGTGAAGAGGGTGAGAGCGATCAATCAGATAGGGAGAGATTATTTCGACGCCGAGATGAGAGGCTTTGGGAGAATCAAACATGCCAACATCTTGACCATTCTGGCTTACCATTTTCGCAAGGAAGAGAAGCTCATAATCTCAGAATACATGCCCAAAGGCAGCTTGTTATATGTTTTGCATGGTGATCGGGGAACATCTCATGCAGATCTGACCTGGCCCGTGCGTTTGAAGATAATCAAGGGAATTGCACAGGGGCTTCGATTCCTTCATTCCCATTTCTCTTCCTACAATCTTCCCCACGGGAACTTGAAATCCAGCAATGTCCTCCTAACACATGATTACGAGCCTCTCCTCTCTGATTACGCCTTACATCCGCTTCTCAACCCCAATTCTTTCAACGCATTGTTCGCCTTCAAATCCCCAGATTACGTGCAGTACCAGGTAATTTCCCAGAAAACCGACGTCTACTGCCTCGGAATCATCATCCTGGAGATCATCACCGGCAAATTCCCTTCTCAGTATCATAGCAACGGCAAGGGCGGCACCGATGTGGTGCAATGGGTGCTCGCTGCGATTTCTGAGAGAAGAGAAGTCGAAGTGATTGATCCCGAAATAGCAAACACCACCGGCTCCTTAGATAAAATGCTGCAAATTCTCCAAGCGGGAGCCGCTTGCACCGAAAGTAACCCCGAACAACGAATTAACTTGAGTGAAGCCATTAGGAGGATAGAGGAGGTACAGGCCTAA 1821 0.4997 MAAVRPRIFFFFFFLLLLTLPSFSSSSDTDALLKLKQSFTNAASLSSWVPNSPPCRWAGIMCDNNIIIGLHLSDMGLSGKVDIDSMLEIKRLRTVSLVNNSFSGPIPEFNRIGALKALYLSTNQFSGEISSDFFSSLNSLKKIWLNGNKFSGTIPDSISQLDNLIEIHLENNEFSGPIPHLKQSIKSLDMSNNKLEGTIPDSLTKFGANSFQGNEELCGKPLDKACAQKVTESKNSSGNVMLIILFIVCLIIAVALFIAVKSRRRLDSDFSMLNRDSVDEVQLNVPSSSESRDSESSRRGTGSKRGAAKSGSTDLVVVNEEKGVFGLPDLMKAAAEVLGNGGLGSAYKAGMTTGLSVVVKRVRAINQIGRDYFDAEMRGFGRIKHANILTILAYHFRKEEKLIISEYMPKGSLLYVLHGDRGTSHADLTWPVRLKIIKGIAQGLRFLHSHFSSYNLPHGNLKSSNVLLTHDYEPLLSDYALHPLLNPNSFNALFAFKSPDYVQYQVISQKTDVYCLGIIILEIITGKFPSQYHSNGKGGTDVVQWVLAAISERREVEVIDPEIANTTGSLDKMLQILQAGAACTESNPEQRINLSEAIRRIEEVQA 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0516 606 FunFam Nuclear pore complex protein NUP107 25 180 - -
Lele22g0516 606 Pfam Protein kinase domain 336 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g0516 606 Gene3D Ribonuclease Inhibitor 25 182 IPR032675 -
Lele22g0516 606 Gene3D Phosphorylase Kinase; domain 1 302 407 - -
Lele22g0516 606 Pfam Leucine rich repeat N-terminal domain 26 63 IPR013210 -
Lele22g0516 606 SUPERFAMILY L domain-like 26 206 - -
Lele22g0516 606 Pfam Leucine rich repeat 115 173 IPR001611 GO:0005515
Lele22g0516 606 ProSiteProfiles Protein kinase domain profile. 332 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g0516 606 Gene3D Ribonuclease Inhibitor 184 224 IPR032675 -
Lele22g0516 606 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 14 605 - -
Lele22g0516 606 SUPERFAMILY Protein kinase-like (PK-like) 336 601 IPR011009 -
Lele22g0516 606 MobiDBLite consensus disorder prediction 281 312 - -
Lele22g0516 606 Gene3D Transferase(Phosphotransferase) domain 1 408 606 - -
Lele22g0516 606 Pfam Leucine Rich Repeat 185 205 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0516 Lele-ChrLele22 3279002 3280909 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0516 8 604 Receptor kinase-like Gene Family AT3G42880 48.418 0.0 611
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele22g0516 Pkinase 5.4e-26 CL0016